RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 OR4C5Q8NGB2 326 aa15.4■□□□□ 0.06
CLIP2-201ENST00000223398 IGFBP3P17936 291 aaPredicted RBP15.4■□□□□ 0.06
CLIP2-201ENST00000223398 Q6ZS92 163 aa15.4■□□□□ 0.06
CLIP2-201ENST00000223398 ZNF362Q5T0B9 420 aaPredicted RBP15.4■□□□□ 0.06
CLIP2-201ENST00000223398 C19orf24Q9BVV8 132 aa15.4■□□□□ 0.06
CLIP2-201ENST00000223398 CGAP01215 116 aa15.4■□□□□ 0.06
CLIP2-201ENST00000223398 DIDO1Q9BTC0 2240 aaKnown RBP15.39■□□□□ 0.05
CLIP2-201ENST00000223398 CLPSP04118 112 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 VMO1Q7Z5L0 202 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 NEUROG1Q92886 237 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 ZSWIM8A7E2V4 1837 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 IFITM10A6NMD0 228 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 KIAA1644Q3SXP7 199 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 ZNF497Q6ZNH5 498 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 RTBDNQ9BSG5 229 aaPredicted RBP15.39■□□□□ 0.05
CLIP2-201ENST00000223398 SLC25A15Q9Y619 301 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 SPTAN1Q13813 2472 aaKnown RBP15.39■□□□□ 0.05
CLIP2-201ENST00000223398 RNASE4P34096 147 aaKnown RBP15.39■□□□□ 0.05
CLIP2-201ENST00000223398 CRIM1Q9NZV1 1036 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 ROS1P08922 2347 aa15.39■□□□□ 0.05
CLIP2-201ENST00000223398 YPEL1O60688 119 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 UCP1P25874 307 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 RHOGP84095 191 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 YPEL2Q96QA6 119 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 MAP1LC3AQ9H492 121 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 RAMP3O60896 148 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 MARVELD3Q96A59 401 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 COL25A1Q9BXS0 654 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-201ENST00000223398 PAM16Q9Y3D7 125 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 H7C2G1 150 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 NPFFO15130 113 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 HLA-DRB1P01911 266 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 MOB4Q9Y3A3 225 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 TRBV6-7A0A0A0MS04 114 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 MPTX1A8MV57 137 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 ZP1P60852 638 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 ANK1P16157 1881 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 NMBP08949 121 aa15.38■□□□□ 0.05
CLIP2-201ENST00000223398 PRB4P10163 310 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-201ENST00000223398 ATP5IP56385 69 aaPredicted RBP15.38■□□□□ 0.05
CLIP2-201ENST00000223398 WNT2P09544 360 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 TRGC1P0CF51 173 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 SRD5A1P18405 259 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 CA7P43166 264 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 DSCR9P59020 149 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 CENPWQ5EE01 88 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 OR11H4Q8NGC9 324 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 DOPEY2Q9Y3R5 2298 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 K7ENP7 123 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 M0QZK8 103 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 C20orf204Q6ZNR8 217 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 ARL6IP6Q8N6S5 226 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 CRYGSP22914 178 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 SP5Q6BEB4 398 aaPredicted RBP15.37■□□□□ 0.05
CLIP2-201ENST00000223398 PARLQ9H300 379 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 LINC00862A6NCI5 91 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 UPK2O00526 184 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 C3orf36Q3SXR2 165 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 NABP1Q96AH0 204 aa15.37■□□□□ 0.05
CLIP2-201ENST00000223398 LDLRAD2Q5SZI1 272 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 LEMD1Q68G75 181 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 PLSCR2Q9NRY7 297 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 GGCTO75223 188 aaKnown RBP15.36■□□□□ 0.05
CLIP2-201ENST00000223398 C2orf68Q2NKX9 166 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 OR52E5Q8NH55 327 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 ZFP30Q9Y2G7 519 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 FAM166AQ6J272 317 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 RPRMQ9NS64 109 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 TRGV2A0A075B6R0 118 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 DIRC3C9JPN6 131 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 SAPCD1Q5SSQ6 148 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 SMDT1Q9H4I9 107 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 BET1LQ9NYM9 111 aa15.36■□□□□ 0.05
CLIP2-201ENST00000223398 TRBV20OR9-2A0A075B6H5 130 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 PI4KAP42356 2102 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 SSC4DQ8WTU2 575 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 H3BVH4 76 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 RBFOX2O43251 390 aaKnown RBP eCLIP15.35■□□□□ 0.052e-8■■□□□ 12.2
CLIP2-201ENST00000223398 STHQ8IWL8 128 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 MAPK1IP1LQ8NDC0 245 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 WFDC12Q8WWY7 111 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 MRPL18Q9H0U6 180 aaKnown RBP15.35■□□□□ 0.05
CLIP2-201ENST00000223398 CACNA1DQ01668 2161 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 OTX1P32242 354 aaPredicted RBP15.35■□□□□ 0.05
CLIP2-201ENST00000223398 LYRM7Q5U5X0 104 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 MIR17HGQ75NE6 70 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 KIR3DL3Q8N743 410 aa15.35■□□□□ 0.05
CLIP2-201ENST00000223398 TRGC2P03986 189 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 DANCRP0C864 163 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 MLNRO43193 412 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 ASIPP42127 132 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 SLC25A28Q96A46 364 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 IGKV1-12A0A0C4DH73 117 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 GRIFINA4D1Z8 144 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 B4DSR2 109 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 IGKV1D-12P01611 117 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 AGAP20933 346 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 CCL1P22362 96 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 CYB5R2Q6BCY4 276 aa15.34■□□□□ 0.05
CLIP2-201ENST00000223398 TGIF2-C20orf24A0A0A6YYL0 155 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms