RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 TMEM183BQ1AE95 376 aa15.15■□□□□ 0.02
CACTIN-201ENST00000221899 MRPL54Q6P161 138 aaKnown RBP15.15■□□□□ 0.02
CACTIN-201ENST00000221899 PLEKHA3Q9HB20 300 aa15.15■□□□□ 0.02
CACTIN-201ENST00000221899 ZNF71Q9NQZ8 489 aaPredicted RBP15.15■□□□□ 0.02
CACTIN-201ENST00000221899 SLC45A2Q9UMX9 530 aa15.15■□□□□ 0.02
CACTIN-201ENST00000221899 COLQQ9Y215 455 aaPredicted RBP15.15■□□□□ 0.02
CACTIN-201ENST00000221899 YLPM1P49750 1951 aaKnown RBP15.15■□□□□ 0.02
CACTIN-201ENST00000221899 MMP23AO75900 390 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 IGKV1-16P04430 117 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 AREGP15514 252 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 SUMO1P63165 101 aaKnown RBP15.14■□□□□ 0.01
CACTIN-201ENST00000221899 SIGLECL1Q8N7X8 197 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 RCHY1Q96PM5 261 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 MIEN1Q9BRT3 115 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 SERTAD4Q9NUC0 356 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 IL19Q9UHD0 177 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 GGTLC3B5MD39 225 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 PMCHP20382 165 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 COMPP49747 757 aaPredicted RBP15.14■□□□□ 0.01
CACTIN-201ENST00000221899 PROCRQ9UNN8 238 aa15.14■□□□□ 0.01
CACTIN-201ENST00000221899 PRR33A8MZF0 331 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 CA1P00915 261 aaPredicted RBP15.13■□□□□ 0.01
CACTIN-201ENST00000221899 CGB3P0DN86 165 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 CGB7P0DN87 165 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 OR9G1Q8NH87 305 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 C20orf144Q9BQM9 153 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 TBL2Q9Y4P3 447 aaKnown RBP15.13■□□□□ 0.01
CACTIN-201ENST00000221899 LY96Q9Y6Y9 160 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 KBTBD11-OT1A0A1B0GTJ5 212 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 Q0VG73 95 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 TIGITQ495A1 244 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 RND1Q92730 232 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 SNRNP40Q96DI7 357 aaKnown RBP15.13■□□□□ 0.01
CACTIN-201ENST00000221899 STARD4Q96DR4 205 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 GNB1LQ9BYB4 327 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 TUBG2Q9NRH3 451 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 PLSCR4Q9NRQ2 329 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 SRRM4A7MD48 611 aaKnown RBP15.13■□□□□ 0.01
CACTIN-201ENST00000221899 RPLP1P05386 114 aaKnown RBP15.13■□□□□ 0.01
CACTIN-201ENST00000221899 SFXN3Q9BWM7 321 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 TMEM167BQ9NRX6 74 aa15.13■□□□□ 0.01
CACTIN-201ENST00000221899 TECRQ9NZ01 308 aaKnown RBP15.13■□□□□ 0.01
CACTIN-201ENST00000221899 PCNX2A6NKB5 2137 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 A0A1B0GWJ7 208 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 AMTP48728 403 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 OR10W1Q8NGF6 305 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 SLC25A10Q9UBX3 287 aaPredicted RBP15.12■□□□□ 0.01
CACTIN-201ENST00000221899 SLC25A15Q9Y619 301 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 GPX1P07203 203 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 CX3CL1P78423 397 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 TMEM136Q6ZRR5 245 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 CORO2AQ92828 525 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 CACNA1GO43497 2377 aa15.12■□□□□ 0.01
CACTIN-201ENST00000221899 TRAV5A0A0B4J249 113 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 SP9P0CG40 484 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 BRS3P32247 399 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 MORN5Q5VZ52 161 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 SARAFQ96BY9 339 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 ARFGEF3Q5TH69 2177 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 DIRC3C9JPN6 131 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 SRIP30626 198 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 LINC00479Q96M42 142 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 CCL13Q99616 98 aa15.11■□□□□ 0.01
CACTIN-201ENST00000221899 SSBP3Q9BWW4 388 aaPredicted RBP15.11■□□□□ 0.01
CACTIN-201ENST00000221899 ZNF253O75346 499 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 LHBP01229 141 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 KLF3P57682 345 aaPredicted RBP15.1■□□□□ 0.01
CACTIN-201ENST00000221899 IBA57Q5T440 356 aaKnown RBP15.1■□□□□ 0.01
CACTIN-201ENST00000221899 FAM216BQ8N7L0 139 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 TMEM208Q9BTX3 173 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 NRN1Q9NPD7 142 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 ZNF586Q9NXT0 402 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 DKK4Q9UBT3 224 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 PRNDQ9UKY0 176 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 TEX50A0A1B0GTY4 177 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 PRCDQ00LT1 54 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 SLC35D1Q9NTN3 355 aa15.1■□□□□ 0.01
CACTIN-201ENST00000221899 TRBV9A0A0B4J1U6 114 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 UPK2O00526 184 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 IGLV2-8P01709 118 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 CT45A6P0DMU7 189 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 CT45A5P0DMU8 189 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 CT45A7P0DMV0 189 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 CFHR2P36980 270 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 FAM19A2Q8N3H0 131 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 DSCAML1Q8TD84 2053 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 M0QZK8 103 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 WT1P19544 449 aaPredicted RBP15.09■□□□□ 0.01
CACTIN-201ENST00000221899 Q8N976 141 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 ZNF439Q8NDP4 499 aa15.09■□□□□ 0.01
CACTIN-201ENST00000221899 A0A1W2PS18 150 aa15.08■□□□□ 0.01
CACTIN-201ENST00000221899 IGHV3-48P01763 117 aa15.08■□□□□ 0.01
CACTIN-201ENST00000221899 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.08■□□□□ 0.01
CACTIN-201ENST00000221899 OR2T6Q8NHC8 308 aa15.08■□□□□ 0.01
CACTIN-201ENST00000221899 FAM168AQ92567 244 aa15.08■□□□□ 0.01
CACTIN-201ENST00000221899 TMEM68Q96MH6 324 aa15.08■□□□□ 0.01
CACTIN-201ENST00000221899 OSTCQ9NRP0 149 aa15.08■□□□□ 0.01
CACTIN-201ENST00000221899 DCAF16Q9NXF7 216 aa15.08■□□□□ 0.01
CACTIN-201ENST00000221899 BMPR1BO00238 502 aa15.08■□□□□ 0
CACTIN-201ENST00000221899 NPSP0C0P6 89 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms