RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 CHCHD2Q9Y6H1 151 aaPredicted RBP12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 FANCMQ8IYD8 2048 aa12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 H0YIZ8 118 aa12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 SRSF3P84103 164 aaKnown RBP12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 ZNF324BQ6AW86 544 aaPredicted RBP12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 ACP7Q6ZNF0 438 aa12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 ZNF525Q8N782 197 aa12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 SCARF2Q96GP6 870 aaPredicted RBP12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 PILRBQ9UKJ0 227 aa12.63□□□□□ -0.39
NDFIP2-201ENST00000218652 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 IFNL4K9M1U5 179 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 C1QTNF9P0C862 333 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 SLC25A28Q96A46 364 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 RNASE7Q9H1E1 156 aaKnown RBP12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 A0A1W2PR77 199 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 PGPEP1LA6NFU8 196 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 TRGV3P03979 118 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 CD55P08174 381 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 PLAURQ03405 335 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 NRN1Q9NPD7 142 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 DOCK5Q9H7D0 1870 aa12.62□□□□□ -0.39
NDFIP2-201ENST00000218652 TSPAN13O95857 204 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 NAPSAO96009 420 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 LINC00614P0C842 121 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 SCGB3A1Q96QR1 104 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 DPM3Q9P2X0 92 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 SPCS1Q9Y6A9 102 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 DOCK1Q14185 1865 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 TET1Q8NFU7 2136 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 REPIN1Q9BWE0 567 aaKnown RBP12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 IGKV1D-13A0A0B4J2D9 117 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 IGKV1-13P0DP09 117 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 BTCP35070 178 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 CENPVQ7Z7K6 275 aaPredicted RBP12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 FAM169BQ8N8A8 192 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 TEX45Q8NA69 505 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 EEF1AKMT3Q96AZ1 226 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 SSBP4Q9BWG4 385 aaPredicted RBP12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 LAMTOR2Q9Y2Q5 125 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 LRRK1Q38SD2 2015 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 TMEM262E9PQX1 116 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 GPR183P32249 361 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 LY6G6FQ5SQ64 297 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 LRTM2Q8N967 370 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 DPH3Q96FX2 82 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 DUX5Q96PT3 197 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 JKAMPQ9P055 326 aa12.61□□□□□ -0.39
NDFIP2-201ENST00000218652 AICDAQ9GZX7 198 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 C21orf62Q9NYP8 219 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 POLR2AP24928 1970 aaKnown RBP12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 J3QW42 95 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 FADS6Q8N9I5 356 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 TOMM7Q9P0U1 55 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 FBXL7Q9UJT9 491 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 TMEM106BQ9NUM4 274 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 COL24A1Q17RW2 1714 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 ATP5LO75964 103 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 PRB3Q04118 309 aaPredicted RBP12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 TMEM30BQ3MIR4 351 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 TNCP24821 2201 aa12.6□□□□□ -0.39
NDFIP2-201ENST00000218652 H3BUT2 72 aa12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 MEF2CQ06413 473 aaPredicted RBP12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 TIMM23BQ5SRD1 257 aa12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 MEGF9Q9H1U4 602 aa12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 PRR19A6NJB7 356 aa12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 CCL20P78556 96 aa12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 ORMDL3Q8N138 153 aa12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
NDFIP2-201ENST00000218652 A0A087WWC5 75 aa12.58□□□□□ -0.39
NDFIP2-201ENST00000218652 TNFRSF18Q9Y5U5 241 aa12.58□□□□□ -0.39
NDFIP2-201ENST00000218652 C10orf126Q8N4M7 172 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 NDUFAF3Q9BU61 184 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 ZNF703Q9H7S9 590 aaPredicted RBP12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 IGKV1-9A0A0C4DH69 117 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 KBTBD11-OT1A0A1B0GTJ5 212 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 B9A039 149 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 CCL3L1P16619 93 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 OR5AN1Q8NGI8 311 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 A0A1B0GV72 72 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 IGKV1D-33P01593 117 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 IGKV1-33P01594 117 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 GFI1BQ5VTD9 330 aa12.58□□□□□ -0.4
NDFIP2-201ENST00000218652 MRPL20Q9BYC9 149 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms