RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 IGLV2-14P01704 120 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 IGKV1-13P0DP09 117 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
UPK3A-201ENST00000216211 RAP2BP61225 183 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 HAGHQ16775 308 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 GTSCR1Q86UQ5 136 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 MMD2Q8IY49 270 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 VKORC1L1Q8N0U8 176 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 TTC9CQ8N5M4 171 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 ZNF486Q96H40 463 aaPredicted RBP11.38□□□□□ -0.59
UPK3A-201ENST00000216211 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 PEMTQ9UBM1 199 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 PRELID3BQ9Y3B1 194 aa11.38□□□□□ -0.59
UPK3A-201ENST00000216211 GOSR2O14653 212 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 OR2J3O76001 311 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 SLC22A5O76082 557 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 HERV-K104P61576 105 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 SUPT4H1P63272 117 aaKnown RBP11.37□□□□□ -0.59
UPK3A-201ENST00000216211 LPCAT3Q6P1A2 487 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 C19orf35Q6ZS72 473 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 SLC38A6Q8IZM9 456 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 UXS1Q8NBZ7 420 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 SPIN2AQ99865 258 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 SPIN2BQ9BPZ2 258 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 TUBA4BQ9H853 241 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 HYDINQ4G0P3 5121 aa11.37□□□□□ -0.59
UPK3A-201ENST00000216211 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.36□□□□□ -0.59
UPK3A-201ENST00000216211 DBX1A6NMT0 343 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 TEX22C9J3V5 150 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 PPP5D1E7EU14 171 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 PPYP01298 95 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 PI3P19957 117 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 VAMP1P23763 118 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 ADAMTSL5Q6ZMM2 481 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 TCTEX1D2Q8WW35 142 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
UPK3A-201ENST00000216211 CRYM-AS1A6NIL9 109 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 E7EUB6 86 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 G3V3Q6 166 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 KBTBD11O94819 623 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 EDN2P20800 178 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 H2BFSP57053 126 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
UPK3A-201ENST00000216211 C15orf32Q32M92 178 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
UPK3A-201ENST00000216211 NECAP1Q8NC96 275 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 OR2K2Q8NGT1 345 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 OR2T35Q8NGX2 323 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 OR4S2Q8NH73 311 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 COQ8AQ8NI60 647 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 GPHA2Q96T91 129 aa11.35□□□□□ -0.59
UPK3A-201ENST00000216211 HSD17B10Q99714 261 aaKnown RBP11.35□□□□□ -0.59
UPK3A-201ENST00000216211 EPPK1P58107 5090 aaKnown RBP11.35□□□□□ -0.59
UPK3A-201ENST00000216211 LCE6AA0A183 80 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 SIX6O95475 246 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 IGHV3-23P01764 117 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 IL6RP08887 468 aaPredicted RBP11.34□□□□□ -0.59
UPK3A-201ENST00000216211 RPL27AP46776 148 aaKnown RBP11.34□□□□□ -0.59
UPK3A-201ENST00000216211 BRWD1-AS2P59051 145 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 FXYD4P59646 89 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 CD81P60033 236 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 RND3P61587 244 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 PUSL1Q8N0Z8 303 aaKnown RBP11.34□□□□□ -0.59
UPK3A-201ENST00000216211 TMEM167AQ8TBQ9 72 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 RETNQ9HD89 108 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 FBXL7Q9UJT9 491 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 DMRT1Q9Y5R6 373 aa11.34□□□□□ -0.59
UPK3A-201ENST00000216211 A0A1B0GW64 132 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 NPIPB5A8MRT5 1133 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 SNAPC5O75971 98 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 CD7P09564 240 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 MYOD1P15172 320 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 PIGPP57054 158 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 SSX9Q7RTT3 188 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 CCDC71LQ8N9Z2 235 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 ZBTB8BQ8NAP8 495 aaPredicted RBP11.33□□□□□ -0.6
UPK3A-201ENST00000216211 OR11H4Q8NGC9 324 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 VSTM2AQ8TAG5 236 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 DYNLRB2Q8TF09 96 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 GALNT14Q96FL9 552 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 NAA60Q9H7X0 242 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 KCNIP3Q9Y2W7 256 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 S4R3C0 116 aa11.33□□□□□ -0.6
UPK3A-201ENST00000216211 TEX13DA0A0J9YY54 714 aaPredicted RBP11.32□□□□□ -0.6
UPK3A-201ENST00000216211 C2orf70A6NJV1 201 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 TNFSF12O43508 249 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 GGCTO75223 188 aaKnown RBP11.32□□□□□ -0.6
UPK3A-201ENST00000216211 NDUFB8O95169 186 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 OR2C1O95371 312 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 AREGP15514 252 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 GNRHRP30968 328 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 MAS1LP35410 378 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 DEFB114Q30KQ6 69 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 ANKRD55Q3KP44 614 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 Q5BKY6 102 aa11.32□□□□□ -0.6
UPK3A-201ENST00000216211 LAMTOR1Q6IAA8 161 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms