RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 C17orf100A8MU93 164 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 HSBP1L1C9JCN9 74 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 GATCO43716 136 aaKnown RBP10.01□□□□□ -0.81
CHPF2-201ENST00000035307 COL8A1P27658 744 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 HSPE1P61604 102 aaKnown RBP10.01□□□□□ -0.81
CHPF2-201ENST00000035307 RPL8P62917 257 aaKnown RBP10.01□□□□□ -0.81
CHPF2-201ENST00000035307 ICAM4Q14773 271 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 EIF4E3Q8N5X7 224 aaKnown RBP10.01□□□□□ -0.81
CHPF2-201ENST00000035307 IMMP2LQ96T52 175 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 ZNF586Q9NXT0 402 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 CLN5O75503 358 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 IGFL3Q6UXB1 125 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 DPPA3Q6W0C5 159 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 FAM90A1Q86YD7 464 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 STPG3Q8N7X2 389 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 FN1P02751 2386 aaKnown RBP10□□□□□ -0.81
CHPF2-201ENST00000035307 PRRC2AP48634 2157 aaKnown RBP10□□□□□ -0.81
CHPF2-201ENST00000035307 A0A1W2PN81 502 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 CGAP01215 116 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 MST1LQ2TV78 715 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 NRN1LQ496H8 165 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 OR4A47Q6IF82 309 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 FOXL2NBQ6ZUU3 175 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 OR1L6Q8NGR2 347 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 CLDND2Q8NHS1 167 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 RAB1CQ92928 201 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 ARL2-SNX15V9GYD0 113 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 LINC00473A8K010 186 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 CXorf1O96002 111 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 LRRC75BQ2VPJ9 315 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 GFI1BQ5VTD9 330 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 GCSAMQ8N6F7 178 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 TMEM106BQ9NUM4 274 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 IDI2-AS1Q9NZ38 188 aa10□□□□□ -0.81
CHPF2-201ENST00000035307 A0A087X0M5 115 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 A0A1B0GX30 115 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 SLC31A2O15432 143 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 IGKV3-15P01624 115 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 HOXB1P14653 301 aaPredicted RBP9.99□□□□□ -0.81
CHPF2-201ENST00000035307 CBLN1P23435 193 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 GPR6P46095 362 aaPredicted RBP9.99□□□□□ -0.81
CHPF2-201ENST00000035307 NMSQ5H8A3 153 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 C10orf113Q5VZT2 155 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 PDPNQ86YL7 162 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 OR2T6Q8NHC8 308 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 SAA2-SAA4A0A096LPE2 208 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 SAA2P0DJI9 122 aaPredicted RBP9.99□□□□□ -0.81
CHPF2-201ENST00000035307 MFAP2P55001 183 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 LCN2P80188 198 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 ECSCRQ19T08 205 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 LURAP1LQ8IV03 231 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 CD177Q8N6Q3 437 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 OR10W1Q8NGF6 305 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 SPSB4Q96A44 273 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 AP1S3Q96PC3 154 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 CHODLQ9H9P2 273 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 PPP1R14DQ9NXH3 145 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 SCO2A0A1W2PP80 73 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 PRRX1P54821 245 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 C1orf162Q8NEQ5 155 aaPredicted RBP9.99□□□□□ -0.81
CHPF2-201ENST00000035307 COQ2Q96H96 371 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 MRPL20Q9BYC9 149 aaKnown RBP9.99□□□□□ -0.81
CHPF2-201ENST00000035307 COA4Q9NYJ1 87 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 LINC00587B1AMM8 73 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 KBTBD11O94819 623 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 KIR2DS2P43631 304 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 ADIPOQQ15848 244 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 MSMPQ1L6U9 139 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 FAM209BQ5JX69 171 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 RNASE6Q93091 150 aaKnown RBP9.99□□□□□ -0.81
CHPF2-201ENST00000035307 SEBOXQ9HB31 216 aaPredicted RBP9.99□□□□□ -0.81
CHPF2-201ENST00000035307 FKBP11Q9NYL4 201 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 JPT1Q9UK76 154 aa9.99□□□□□ -0.81
CHPF2-201ENST00000035307 APOBEC3AP31941 199 aaPredicted RBP9.98□□□□□ -0.81
CHPF2-201ENST00000035307 PLA2G5P39877 138 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 CSN1S1P47710 185 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 RPEL1Q2QD12 228 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 ZNF506Q5JVG8 444 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 DNM1P46Q6ZS02 220 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 VN1R17PQ8TDU5 208 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 NABP2Q9BQ15 211 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 CXorf65A6NEN9 183 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 ZNF785A8K8V0 405 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 GNG7O60262 68 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 IGHV3-23P01764 117 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 CXCL1P09341 107 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
CHPF2-201ENST00000035307 LYPD2Q6UXB3 125 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 TCF23Q7RTU1 214 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 RPP25LQ8N5L8 163 aaKnown RBP9.98□□□□□ -0.81
CHPF2-201ENST00000035307 VSTM2AQ8TAG5 236 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 IGHV3-49A0A0A0MS15 119 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 E7EQL1 145 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 K7EQM0 130 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 MLANAQ16655 118 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 LEMD1Q68G75 181 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 PCSK4Q6UW60 755 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 COLCA1Q6ZS62 124 aa9.98□□□□□ -0.81
CHPF2-201ENST00000035307 DERL1Q9BUN8 251 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms