RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 IDI2-AS1Q9NZ38 188 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 SBK3P0C264 359 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 SELENOHQ8IZQ5 122 aaKnown RBP5.19□□□□□ -1.58
VPS13D-201ENST00000011700 MS4A3Q96HJ5 214 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 GFRA4Q9GZZ7 299 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 SMOC1Q9H4F8 434 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 CALYQ9NYX4 217 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 EREGO14944 169 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 FCGR2BP31994 310 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-201ENST00000011700 CCL20P78556 96 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF818PQ6ZRF7 136 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 OR11H4Q8NGC9 324 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 RFESDQ8TAC1 157 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 ORAOV1Q8WV07 137 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 NPFFR1Q9GZQ6 430 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 SEMA5BQ9P283 1151 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 IGHV3-20A0A0C4DH32 117 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 NBEAP1P0C6P0 100 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 THSD4Q6ZMP0 1018 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 DLX4Q92988 240 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-201ENST00000011700 GDF15Q99988 308 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 C5orf66Q9H5L9 145 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 TRBV5-7A0A0A0MS05 114 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 M0R2P5 195 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 LILRA6Q6PI73 481 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 SPSB3Q6PJ21 355 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 TRAV9-2A0A087WT02 112 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 SOCS1O15524 211 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 GAGE2BQ13066 116 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 GAGE2EQ4V326 116 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 LILRA3Q8N6C8 439 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-201ENST00000011700 OTORQ9NRC9 128 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 GAGE2DQ9UEU5 116 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 IL11P20809 199 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 COX7A1P24310 79 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 SOX8P57073 446 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM170BQ5T4T1 132 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 MBNL2Q5VZF2 373 aaKnown RBP5.19□□□□□ -1.58
VPS13D-201ENST00000011700 VN1R4Q7Z5H5 301 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 GVQW1Q8N7I0 195 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 NHP2Q9NX24 153 aaKnown RBP5.19□□□□□ -1.58
VPS13D-201ENST00000011700 FABP5P3A8MUU1 101 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 LILRA1O75019 489 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 OR9G9P0C7N8 305 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF79Q15937 498 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 MYEOVQ96EZ4 313 aa5.19□□□□□ -1.58
VPS13D-201ENST00000011700 PLA2G10O15496 165 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 PDLIM4P50479 330 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 COL10A1Q03692 680 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 GAGE13Q4V321 117 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 CFHR5Q9BXR6 569 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 PEX7O00628 323 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 UBE2CO00762 179 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 FOXC1Q12948 553 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 TSPO2Q5TGU0 170 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM144Q7Z5S9 345 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 MRPL27Q9P0M9 148 aaKnown RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 NOTCH2Q04721 2471 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 LOC389332A0A1B0GUA5 103 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 FAM231BA6NCW3 169 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 HYAL3O43820 417 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 OR2H2O95918 312 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 RAI1Q7Z5J4 1906 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF815PA8K554 130 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 HIGD1CA8MV81 97 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 PIGYQ3MUY2 71 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 GTSCR1Q86UQ5 136 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 ZNF418Q8TF45 676 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 ARRDC1-AS1Q9H2J1 176 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 TRAV21A0A0B4J279 112 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 LPAL2Q16609 132 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 LINC00305Q7Z4B0 112 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 PLEKHB2Q96CS7 222 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 NABP2Q9BQ15 211 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 TRAV8-7A0A075B6U6 113 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 PGPA6NDG6 321 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 PGFP49763 221 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 GFRA1P56159 465 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 NR2C2APQ86WQ0 139 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 TRBV24-1A0A075B6N3 115 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 A0A1W2PP11 408 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 C15orf61A6NNL5 157 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 YPEL1O60688 119 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 IGHV4-34P06331 123 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 YPEL2Q96QA6 119 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 IGHV5-10-1A0A0J9YXX1 117 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 ATXN7O15265 892 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 LINC00271P0C7V0 271 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 APOBEC3AP31941 199 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 TMEM249Q2WGJ8 235 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 MRPL14Q6P1L8 145 aaKnown RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 TCF19Q9Y242 345 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 IGHV1OR15-9A0A0B4J2B8 117 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 PGLYRP1O75594 196 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 PF4P02776 101 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 CXorf67Q86X51 503 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 CT55Q8WUE5 264 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 SRSF12Q8WXF0 261 aaKnown RBP5.18□□□□□ -1.58
VPS13D-201ENST00000011700 SPXQ9BT56 116 aa5.18□□□□□ -1.58
VPS13D-201ENST00000011700 KLK13Q9UKR3 277 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms