RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Zcchc14Q8VIG0 956 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Rps21Q9CQR2 83 aaKnown RBP8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 P2ry4Q9JJS7 361 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Atoh7Q9Z2E5 149 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Dock11A2AF47 2073 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 CymB7ZWD6 379 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Susd5G3UW60 619 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Pnliprp2P17892 482 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Slc25a26Q5U680 274 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 PnlipQ6P8U6 465 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Q8BTG6 205 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Olfr1293-psA0A1L1SVB5 326 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Mn1D3YWE6 1297 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Ccl1P10146 92 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 F2rl1P55086 399 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 PtafrQ62035 341 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Zfp933Q6PEE4 468 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Zfp729bQ80VN4 1045 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 DutQ8VCG1 200 aaKnown RBP8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Cma2Q91VB1 246 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Defa35E9QLQ1 93 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Try10Q792Z1 246 aaKnown RBP8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Anapc10Q8K2H6 185 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Ceacam11Q9D0Z8 303 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 Asb5Q9D1A4 329 aa8.9□□□□□ -0.98
Ubr1-201ENSMUST00000028728 A730046J19RikA0A1B0GSN8 89 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Wnt2bO70283 389 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 MidnQ3TPJ7 465 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr5Q60889 312 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Prg4Q9JM99 1054 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Srsf10Q9R0U0 262 aaKnown RBP8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ssty1P13675 232 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ifna14Q810G3 189 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm10309Q8C648 119 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Foxn4Q8K3Q3 521 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 TctaQ8VEA7 122 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr1431Q8VF59 312 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Q9CR34 168 aa8.9□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Defa30E9QPZ2 93 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 C1ql1O88992 258 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr143P34985 313 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm10750Q3V0I0 133 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Tmprss13Q5U405 543 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Plrg1Q922V4 513 aaKnown RBP8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Glrx2Q923X4 156 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 9330161L09RikQ9D253 136 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Akip1Q9JJR5 212 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Opn4Q9QXZ9 521 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Scn9aQ62205 1984 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Igkv10-94A0A075B5L1 115 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm14409A2ARR8 349 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ier3P46694 153 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Bcl2l15Q08ED0 167 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Q149G0 166 aaKnown RBP8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Tmeff1Q6PFE7 372 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Harbi1Q8BR93 349 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Prss42Q8VIF2 335 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Q9DAA3 117 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ttc3O88196 1979 aaKnown RBP8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm14124A2AU83 715 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr1154L7MU57 310 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Mrgprb2Q3KNA1 338 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr354Q8VGJ8 317 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Aifm1Q9Z0X1 612 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm21778A0A087WNP8 232 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Klf16P58334 251 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Trav5d-4Q5R1F6 114 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Megf10Q6DIB5 1147 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 TxnipQ8BG60 397 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rgs13Q8K443 158 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Wwtr1Q9EPK5 395 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 GferP56213 198 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ppp1ccP63087 323 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Tmem204Q7TQI0 226 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Stpg2Q8C8J0 561 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Slc18b1D3Z5L6 459 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Zfp707F6QUN2 391 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Sh2d1bO35324 132 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Vmn1r89Q8R256 316 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Dolpp1Q9JMF7 238 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Syt11Q9R0N3 430 aa8.89□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr1248A0A1L1SSZ5 307 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ly6g6fB2RXM6 300 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 1700003H04RikE9PXM2 192 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 MyogP12979 224 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Q8CDS7 251 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Nus1Q99LJ8 297 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Fzd5Q9EQD0 585 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Actl6aQ9Z2N8 429 aaKnown RBP8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm14408E9Q6B9 136 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Zfp764E9QAP1 431 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Cd81P35762 236 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm44501A8R0T9 150 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rbm24D3Z4I3 236 aaKnown RBP8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr554E9Q546 317 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 P18524 117 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 BC147527Q3V185 167 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Cd200r4Q6XJV4 270 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ankrd34cQ8BLB8 534 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Mcts2Q9CQ21 181 aa8.88□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms