RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Klk1b26P36369 261 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 ApodP51910 189 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Rps23P62267 143 aaKnown RBP11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Sf3a2Q62203 475 aaKnown RBP11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Vmn1r235Q8R297 328 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr368Q8VF22 327 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr593Q8VF28 327 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Nudt3Q9JI46 168 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Fzr1Q9R1K5 493 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Vsig2Q9Z109 328 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm36864A0A1Y7VJE6 447 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm20767O70517 169 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Trav8d-2Q5R1B6 112 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Prodh2Q8VCZ9 456 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Pam16Q9CQV1 125 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Med13Q5SWW4 2171 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ighv5-15A0A0A6YWC7 117 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm6880A3KG45 208 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Bcl2P10417 236 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Lsm6P62313 80 aaKnown RBP11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Lrrc30Q3UV48 300 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm21943Q5FWD5 227 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Alkbh6Q8K2U2 238 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Rab40cQ8VHQ4 281 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gdf15Q9Z0J7 303 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Anapc1P53995 1944 aaKnown RBP11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 SiglechB7ZMQ6 332 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm4744D3Z3S5 154 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 BC035044E0CXF8 138 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr191L7N1Z8 309 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Lin7cO88952 197 aaKnown RBP11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 GzmbP04187 247 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ppp1cbP62141 327 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Supt4h1aP63271 117 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 PjvkQ0ZLH2 352 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 9130008F23RikQ9D2Z6 181 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Wdr5bQ9D7H2 328 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cryba2Q9JJV1 197 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 S1pr3Q9Z0U9 378 aa11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ndufa7Q9Z1P6 113 aaKnown RBP11.05□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Vmn1r160E9Q346 307 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Vmn1r123L7N270 307 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cdx2P43241 311 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 H2-T22Q31615 379 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 G6pc3Q6NSQ9 346 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Rhno1Q8K3A4 235 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Prss45Q8K4I7 317 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Znhit1Q8R331 154 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr1030Q8VFL5 318 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Fam89bQ9QUI1 189 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm8251F6VUT6 1994 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr1328B1ARV2 313 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 C3ar1O09047 477 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cib3Q0P523 160 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr1371Q7TQT7 311 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Zfp799Q8BHK4 648 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 TskuQ8CBR6 354 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Zc3h3Q8CHP0 950 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Fcrl1Q8R4Y0 343 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Nkg7Q99PA5 165 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 E030025P04RikA2A6V5 185 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr1029A2ATE0 324 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 CckarO08786 436 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cst7O89098 144 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 PkibQ04758 92 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Psmb6Q60692 238 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr112Q8C0S2 320 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Rbpms2Q8VC52 206 aaKnown RBP11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ykt6Q9CQW1 198 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Xrcc3Q9CXE6 349 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Lmntd1Q9D4C1 413 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Srp19Q9D7A6 144 aa11.04□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Tet2Q4JK59 1912 aaKnown RBP11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Crybg1A0A0G2JG52 2065 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm12666A2AMD0 254 aaKnown RBP11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 4930435E12RikA6X8Z9 381 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Hoxb1P17919 297 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Fgf7P36363 194 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 ShbgP97497 403 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Slc35b1P97858 322 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cd55bQ61476 407 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ankrd33Q8BXP5 385 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr786Q8VFH8 312 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Lamp5Q9D387 280 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Akap6E9Q9K8 2307 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Mrgprb2Q3KNA1 338 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Lclat1Q3UN02 376 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Npy6rQ61212 371 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Dusp23Q6NT99 150 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr1396Q7TQS8 315 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Zpld1Q8BGZ8 415 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ssmem1Q9D9Y8 244 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 AcacaQ5SWU9 2345 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ighv6-3A0A075B5T2 118 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Fam53aE9PV82 402 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm9772F6XPD8 135 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm21788J3QNH3 180 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm10666K7N6B8 321 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Vmn1r121K7N6J4 314 aa11.03□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Smr2O09133 150 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 81.3 ms