RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 STARD4Q96DR4 205 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 OR2V2Q96R30 315 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 C15orf61A6NNL5 157 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 CA2P00918 260 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 IGFBP2P18065 325 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 WT1P19544 449 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-233ENST00000642021 LINC00310P59036 64 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 RBX1P62877 108 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 OR4A47Q6IF82 309 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 VHLLQ6RSH7 139 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 MOB3BQ86TA1 216 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 DEFB123Q8N688 67 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 BEND2Q8NDZ0 799 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 SAA2-SAA4A0A096LPE2 208 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 PRR33A8MZF0 331 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 SAA2P0DJI9 122 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-233ENST00000642021 TEPPQ6URK8 271 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 OR4P4Q8NGL7 312 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 TXNDC17Q9BRA2 123 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 TUBG2Q9NRH3 451 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 POLR3KQ9Y2Y1 108 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-233ENST00000642021 TNCP24821 2201 aa11.36□□□□□ -0.59
PHGDH-233ENST00000642021 ACTL6BO94805 426 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 CGAP01215 116 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 NPY1RP25929 384 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 SLC24A4Q8NFF2 622 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 HINT2Q9BX68 163 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 SLC25A15Q9Y619 301 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 TRGV8A0A0C4DH27 118 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 SPRY3O43610 288 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 ZNF83P51522 516 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 ZNF90Q03938 601 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 OR5I1Q13606 314 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 SEM1Q6ZVN7 128 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 MIR17HGQ75NE6 70 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 OR4S2Q8NH73 311 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 MS4A10Q96PG2 267 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 TMEM14BQ9NUH8 114 aa11.35□□□□□ -0.59
PHGDH-233ENST00000642021 LINC00869P0C866 280 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 HSPE1P61604 102 aaKnown RBP11.34□□□□□ -0.59
PHGDH-233ENST00000642021 BHLHA15Q7RTS1 189 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-233ENST00000642021 CBLN4Q9NTU7 201 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 IDI2-AS1Q9NZ38 188 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 ITGB1BP1O14713 200 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 LHBP01229 141 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 CFHR2P36980 270 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 RHOBP62745 196 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 PRR20EP86478 221 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 PRR20CP86479 221 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 PRR20DP86480 221 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 PRR20BP86481 221 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 PRR20AP86496 221 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 PPP1R35Q8TAP8 253 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 DSCAMO60469 2012 aa11.34□□□□□ -0.59
PHGDH-233ENST00000642021 F2Z2F3 143 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 GATA2P23769 480 aaPredicted RBP11.33□□□□□ -0.59
PHGDH-233ENST00000642021 BMI1P35226 326 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 RPL29P47914 159 aaKnown RBP11.33□□□□□ -0.59
PHGDH-233ENST00000642021 MLANAQ16655 118 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 TDRG1Q3Y452 100 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 LYG1Q8N1E2 194 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 ITLN1Q8WWA0 313 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 SNHG12Q9BXW3 62 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 IL36BQ9NZH7 164 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 NAGKQ9UJ70 344 aa11.33□□□□□ -0.59
PHGDH-233ENST00000642021 IGKV1OR2-108A0A075B7D4 117 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 MMP23AO75900 390 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 SARAFQ96BY9 339 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 EAF1Q96JC9 268 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-233ENST00000642021 BTF3L4Q96K17 158 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 CLUHP3Q96NS8 147 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 PROCRQ9UNN8 238 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 FOXA2Q9Y261 457 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-233ENST00000642021 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 Q6ZWC4 215 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 FAM216AQ8WUB2 273 aa11.33□□□□□ -0.6
PHGDH-233ENST00000642021 ZCCHC14Q8WYQ9 949 aaKnown RBP11.33□□□□□ -0.6
PHGDH-233ENST00000642021 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
PHGDH-233ENST00000642021 SRRM4A7MD48 611 aaKnown RBP11.32□□□□□ -0.6
PHGDH-233ENST00000642021 M0R1B8 84 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 SELENOTP62341 195 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 DEFB108BQ8NET1 73 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 NEUROG1Q92886 237 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 C11orf52Q96A22 123 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 SNRNP40Q96DI7 357 aaKnown RBP11.32□□□□□ -0.6
PHGDH-233ENST00000642021 TRGV10A0A0A0MS01 117 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 KBTBD11-OT1A0A1B0GTJ5 212 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 CRYBB3P26998 211 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 KIR2DS2P43631 304 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 IER3P46695 156 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 LGALS4P56470 323 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 ERVFC1-1P60608 527 aa11.32□□□□□ -0.6
PHGDH-233ENST00000642021 GAGE1Q13065 139 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms