RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 BCL2P10415 239 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 RAB5AP20339 215 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 UBE2KP61086 200 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 LMO4P61968 165 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 RPS16P62249 146 aaKnown RBP7.18□□□□□ -1.26
PHGDH-219ENST00000641513 TMEM267Q0VDI3 215 aaPredicted RBP7.18□□□□□ -1.26
PHGDH-219ENST00000641513 HABP2Q14520 560 aaPredicted RBP7.18□□□□□ -1.26
PHGDH-219ENST00000641513 SPANXN5Q5MJ07 72 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 OR4A47Q6IF82 309 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 SLC25A24Q6NUK1 477 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 HAPLN4Q86UW8 402 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 LILRB2Q8N423 598 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 KIR3DL3Q8N743 410 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 BEND2Q8NDZ0 799 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 OR52E5Q8NH55 327 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 SFT2D1Q8WV19 159 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 TAF15Q92804 592 aaKnown RBP eCLIP7.18□□□□□ -1.26
PHGDH-219ENST00000641513 LHX4Q969G2 390 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 FLYWCH2Q96CP2 140 aaKnown RBP7.18□□□□□ -1.26
PHGDH-219ENST00000641513 TVP23CQ96ET8 276 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 RHOVQ96L33 236 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 HARBI1Q96MB7 349 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 NIPSNAP3BQ9BS92 247 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 PCGF1Q9BSM1 259 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 GGACTQ9BVM4 153 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 WASHC3Q9Y3C0 194 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 INSIG2Q9Y5U4 225 aa7.18□□□□□ -1.26
PHGDH-219ENST00000641513 IGHV4-30-2A0A087WSY4 118 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 TRAV3A0A0B4J244 114 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 IGHV4-61A0A0C4DH41 118 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 C5orf52A6NGY3 159 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 H0YJW9 148 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 H3BQ15 152 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 MPDU1O75352 247 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 TOX4O94842 621 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 IGLV1-47P01700 117 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 IGKV1-16P04430 117 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 SNRNP70P08621 437 aaKnown RBP7.17□□□□□ -1.26
PHGDH-219ENST00000641513 MDKP21741 143 aaPredicted RBP7.17□□□□□ -1.26
PHGDH-219ENST00000641513 PRTN3P24158 256 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 HTR1DP28221 377 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 MC5RP33032 325 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 CEACAM3P40198 252 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 LGALS4P56470 323 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 DSCR9P59020 149 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 RPP30P78346 268 aaKnown RBP7.17□□□□□ -1.26
PHGDH-219ENST00000641513 RUNX1Q01196 453 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 SLC38A11Q08AI6 406 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 CLEC12BQ2HXU8 276 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 RBMS3Q6XE24 437 aaKnown RBP7.17□□□□□ -1.26
PHGDH-219ENST00000641513 THNSL2Q86YJ6 484 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 PDPNQ86YL7 162 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 TMEM217Q8N7C4 229 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 OR4P4Q8NGL7 312 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 OSR1Q8TAX0 266 aaPredicted RBP7.17□□□□□ -1.26
PHGDH-219ENST00000641513 DTD1Q8TEA8 209 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 ST6GALNAC6Q969X2 333 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 RCC1LQ96I51 464 aaKnown RBP7.17□□□□□ -1.26
PHGDH-219ENST00000641513 HINT2Q9BX68 163 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 SAV1Q9H4B6 383 aaPredicted RBP7.17□□□□□ -1.26
PHGDH-219ENST00000641513 ENY2Q9NPA8 101 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 VAX2Q9UIW0 290 aa7.17□□□□□ -1.26
PHGDH-219ENST00000641513 IGHV1-3A0A0C4DH29 117 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 CTXND1A0A1B0GTU2 59 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 ZNF98A6NK75 572 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 PMS2P5A8MQ11 134 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 TMEM250H0YL14 139 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 METTL15P1P0C7V9 234 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 RND2P52198 227 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 ZNF137PP52743 207 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 KRTAP10-9P60411 292 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 SPCS3P61009 180 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 CCL20P78556 96 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 RELBQ01201 579 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 TPTE2P1Q5T6R2 138 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 ZNF429Q86V71 674 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 OR5AN1Q8NGI8 311 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 OR4C13Q8NGP0 309 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 ZDHHC16Q969W1 377 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 RARRES2Q99969 163 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 CTDSP1Q9GZU7 261 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 HEYLQ9NQ87 328 aaPredicted RBP7.16□□□□□ -1.26
PHGDH-219ENST00000641513 MANBALQ9NQG1 85 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 KCNIP2Q9NS61 270 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 RPRMQ9NS64 109 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 PRNDQ9UKY0 176 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 HILPDAQ9Y5L2 63 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 OR51B2Q9Y5P1 312 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 MYO18BQ8IUG5 2567 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 FLNCQ14315 2725 aa7.16□□□□□ -1.26
PHGDH-219ENST00000641513 UBR5O95071 2799 aaPredicted RBP7.15□□□□□ -1.26
PHGDH-219ENST00000641513 SPTAN1Q13813 2472 aaKnown RBP7.15□□□□□ -1.26
PHGDH-219ENST00000641513 MAP1LC3B2A6NCE7 125 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 C15orf61A6NNL5 157 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 SRRM4A7MD48 611 aaKnown RBP7.15□□□□□ -1.26
PHGDH-219ENST00000641513 VWC2LB2RUY7 222 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 C17orf112F2Z3M2 114 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 UPK2O00526 184 aa7.15□□□□□ -1.26
PHGDH-219ENST00000641513 OR2C1O95371 312 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms