RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 POU2AF1Q16633 256 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 DEFB135Q30KP9 77 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 GDPD1Q8N9F7 314 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 OR5AP2Q8NGF4 316 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 MARC2Q969Z3 335 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 AIFM2Q9BRQ8 373 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 FXYD6Q9H0Q3 95 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 Q9H521 79 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 COMMD9Q9P000 198 aa12.45□□□□□ -0.42
PHGDH-213ENST00000641272 A0A0J9YWU9 116 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 MFAP2P55001 183 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 SCAND1P57086 179 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 ANKRD55Q3KP44 614 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 SLC25A24Q6NUK1 477 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 UBAC2Q8NBM4 344 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 C20orf24Q9BUV8 137 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 ZNF436Q9C0F3 470 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-213ENST00000641272 PLEKHA2Q9HB19 425 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 DIABLOQ9NR28 239 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 THYN1Q9P016 225 aa12.44□□□□□ -0.42
PHGDH-213ENST00000641272 A0A0A6YYH2 397 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 A6NJ64 397 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 MARCH11A6NNE9 402 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 PMP2P02689 132 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 C8orf88P0DMB2 117 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 PTBP1P26599 531 aaKnown RBP eCLIP12.43□□□□□ -0.42
PHGDH-213ENST00000641272 CBX5P45973 191 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 OR2C3Q8N628 320 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 GIMAP1Q8WWP7 306 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 LINC00476Q8WZB0 136 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 ZNF2Q9BSG1 426 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-213ENST00000641272 CHRDL1Q9BU40 450 aa12.43□□□□□ -0.42
PHGDH-213ENST00000641272 MRPL27Q9P0M9 148 aaKnown RBP12.43□□□□□ -0.42
PHGDH-213ENST00000641272 TRAV25A0A0B4J276 109 aa12.42□□□□□ -0.42
PHGDH-213ENST00000641272 TEX50A0A1B0GTY4 177 aa12.42□□□□□ -0.42
PHGDH-213ENST00000641272 SERPINE2P07093 398 aa12.42□□□□□ -0.42
PHGDH-213ENST00000641272 GNRHRP30968 328 aa12.42□□□□□ -0.42
PHGDH-213ENST00000641272 G6PCP35575 357 aa12.42□□□□□ -0.42
PHGDH-213ENST00000641272 RFX2P48378 723 aa12.42□□□□□ -0.42
PHGDH-213ENST00000641272 ODF3L2Q3SX64 289 aa12.42□□□□□ -0.42
PHGDH-213ENST00000641272 SPAG8Q99932 426 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-213ENST00000641272 SRSF8Q9BRL6 282 aaKnown RBP12.42□□□□□ -0.42
PHGDH-213ENST00000641272 DAZ1Q9NQZ3 744 aaKnown RBP12.42□□□□□ -0.42
PHGDH-213ENST00000641272 LY6G6CO95867 125 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 KRASP01116 189 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 RPL35AP18077 110 aaKnown RBP12.41□□□□□ -0.42
PHGDH-213ENST00000641272 LPAR6P43657 344 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 ELLP55199 621 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-213ENST00000641272 TAS2R20P59543 309 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 Q56UQ5 140 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 LYG2Q86SG7 212 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 SLC38A6Q8IZM9 456 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 OR1L8Q8NGR8 309 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 VN1R17PQ8TDU5 208 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 FCAMRQ8WWV6 532 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 LSM10Q969L4 123 aaKnown RBP12.41□□□□□ -0.42
PHGDH-213ENST00000641272 MOB3AQ96BX8 217 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 C5orf66Q9H5L9 145 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 C21orf62Q9NYP8 219 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 OR51B2Q9Y5P1 312 aa12.41□□□□□ -0.42
PHGDH-213ENST00000641272 F11RQ9Y624 299 aaKnown RBP12.41□□□□□ -0.42
PHGDH-213ENST00000641272 IGHV3-49A0A0A0MS15 119 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 F8W735 103 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-213ENST00000641272 CYB5BO43169 146 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 F2RP25116 425 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 APOC4P55056 127 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 LSM3P62310 102 aaKnown RBP12.4□□□□□ -0.42
PHGDH-213ENST00000641272 PHLDA2Q53GA4 152 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 TMEM69Q5SWH9 247 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 THOC7Q6I9Y2 204 aaKnown RBP12.4□□□□□ -0.42
PHGDH-213ENST00000641272 SAMD12Q8N8I0 201 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 TSPAN14Q8NG11 270 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 OR5H2Q8NGV7 314 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 CD300LFQ8TDQ1 290 aa12.4□□□□□ -0.42
PHGDH-213ENST00000641272 BSCL2Q96G97 398 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-213ENST00000641272 YTHDF1Q9BYJ9 559 aaKnown RBP12.4□□□□□ -0.42
PHGDH-213ENST00000641272 DBX1A6NMT0 343 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 K7EIM0 57 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 TSPAN4O14817 238 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 XRCC3O43542 346 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 PGLYRP1O75594 196 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-213ENST00000641272 ADMP35318 185 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 ZNF124Q15973 351 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 UBE2NLQ5JXB2 153 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 OR5B3Q8NH48 314 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 SCARB1Q8WTV0 552 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 ANAPC10Q9UM13 185 aa12.39□□□□□ -0.43
PHGDH-213ENST00000641272 IGKV3-7A0A075B6H7 116 aa12.38□□□□□ -0.43
PHGDH-213ENST00000641272 NDUFA4O00483 81 aa12.38□□□□□ -0.43
PHGDH-213ENST00000641272 SPRY2O43597 315 aa12.38□□□□□ -0.43
PHGDH-213ENST00000641272 SNAPC5O75971 98 aa12.38□□□□□ -0.43
PHGDH-213ENST00000641272 CTSDP07339 412 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-213ENST00000641272 TFPI2P48307 235 aa12.38□□□□□ -0.43
PHGDH-213ENST00000641272 HSD17B13Q7Z5P4 300 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-213ENST00000641272 BORCS5Q969J3 196 aa12.38□□□□□ -0.43
PHGDH-213ENST00000641272 DGCR14Q96DF8 476 aaKnown RBP12.38□□□□□ -0.43
PHGDH-213ENST00000641272 NUPR2A6NF83 97 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms