RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CCL20P78556 96 aa13.93□□□□□ -0.18
PHGDH-208ENST00000641023 C2orf83Q53S99 150 aa13.93□□□□□ -0.18
PHGDH-208ENST00000641023 SVBPQ8N300 66 aa13.93□□□□□ -0.18
PHGDH-208ENST00000641023 CLDND2Q8NHS1 167 aa13.93□□□□□ -0.18
PHGDH-208ENST00000641023 CARHSP1Q9Y2V2 147 aaKnown RBP13.93□□□□□ -0.18
PHGDH-208ENST00000641023 TNCP24821 2201 aa13.93□□□□□ -0.18
PHGDH-208ENST00000641023 MYO18BQ8IUG5 2567 aa13.93□□□□□ -0.18
PHGDH-208ENST00000641023 LMO4P61968 165 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 LCN2P80188 198 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 SP5Q6BEB4 398 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-208ENST00000641023 VMO1Q7Z5L0 202 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 OR10W1Q8NGF6 305 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 MBD3L1Q8WWY6 194 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 SCRT1Q9BWW7 348 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 USP9XQ93008 2570 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-208ENST00000641023 AKAP6Q13023 2319 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 A0A1W2PPI3 338 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 ODF3BA8MYP8 253 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 ACTL6BO94805 426 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 BSXQ3C1V8 233 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 FFAR4Q5NUL3 377 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 ACSM6Q6P461 480 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 MMD2Q8IY49 270 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 RCC1LQ96I51 464 aaKnown RBP13.92□□□□□ -0.18
PHGDH-208ENST00000641023 ARHGAP32A7KAX9 2087 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 ZNF462Q96JM2 2506 aa13.92□□□□□ -0.18
PHGDH-208ENST00000641023 IGHV2-70DA0A0C4DH43 119 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 RBFOX3A6NFN3 312 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 FAM157AC9JC47 383 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 FNDC10F2Z333 226 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 KLRD1Q13241 179 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 HCP5Q6MZN7 132 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 LCN15Q6UWW0 184 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 RPP25LQ8N5L8 163 aaKnown RBP13.91□□□□□ -0.18
PHGDH-208ENST00000641023 SLC39A9Q9NUM3 307 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 C9JQL5 133 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 E7EUB6 86 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 PPT1P50897 306 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 PAX2Q02962 417 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 PSG5Q15238 335 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 ZNF726P1Q15940 193 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 ZNF787Q6DD87 383 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 TEPPQ6URK8 271 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 OR10G4Q8NGN3 311 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 OR10G9Q8NGN4 311 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 OR10G7Q8NGN6 311 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 HILPDAQ9Y5L2 63 aa13.91□□□□□ -0.18
PHGDH-208ENST00000641023 EPG5Q9HCE0 2579 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 TIMM23O14925 209 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 FOXH1O75593 365 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 RNASE2P10153 161 aaKnown RBP13.9□□□□□ -0.18
PHGDH-208ENST00000641023 M6PRP20645 277 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 ARSJQ5FYB0 599 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-208ENST00000641023 LDLRAD2Q5SZI1 272 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 MRPL41Q8IXM3 137 aaKnown RBP13.9□□□□□ -0.18
PHGDH-208ENST00000641023 FAM168AQ92567 244 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 PIMREGQ9BSJ6 248 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 TPSG1Q9NRR2 321 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 SIGLEC9Q9Y336 463 aa13.9□□□□□ -0.18
PHGDH-208ENST00000641023 NDUFS8O00217 210 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 IGKV1D-33P01593 117 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 IGKV1-33P01594 117 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 CRYGBP07316 175 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 MAS1LP35410 378 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 SUB1P53999 127 aaKnown RBP eCLIP13.89□□□□□ -0.19
PHGDH-208ENST00000641023 RAB31Q13636 194 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 PRSS8Q16651 343 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 ACOT6Q3I5F7 207 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-208ENST00000641023 PPP1R27Q86WC6 154 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 SIRPDQ9H106 197 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 KCNIP2Q9NS61 270 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 METTL1Q9UBP6 276 aaKnown RBP13.89□□□□□ -0.19
PHGDH-208ENST00000641023 LSM4Q9Y4Z0 139 aaKnown RBP13.89□□□□□ -0.19
PHGDH-208ENST00000641023 MAP1LC3B2A6NCE7 125 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 CYB5BO43169 146 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 CNTFRP26992 372 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 OPRK1P41145 380 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 LGALS4P56470 323 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 C10orf55Q5SWW7 151 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 CCDC144NLQ6NUI1 221 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 LHFPL4Q7Z7J7 247 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 RARRES2Q99969 163 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 ACTR3CQ9C0K3 210 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-208ENST00000641023 MAP1LC3BQ9GZQ8 125 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 SLC35B3Q9H1N7 401 aa13.89□□□□□ -0.19
PHGDH-208ENST00000641023 CTXND1A0A1B0GTU2 59 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 CGB1A6NKQ9 187 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 TOX4O94842 621 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 SNAPINO95295 136 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 WT1-ASQ06250 92 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 HABP2Q14520 560 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-208ENST00000641023 GUCA2BQ16661 112 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 HAGHQ16775 308 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 MRGPRG-AS1Q2M3A8 158 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 MINOS1Q5TGZ0 78 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 MGST2Q99735 147 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 NKX6-2Q9C056 277 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-208ENST00000641023 MINOS1-NBL1R4GNA1 71 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 TACC2O95359 2948 aa13.88□□□□□ -0.19
PHGDH-208ENST00000641023 OOSP1A8MZH6 123 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms