RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 GCSAMLQ5JQS6 135 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 SEMA5BQ9P283 1151 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 THADAQ6YHU6 1953 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 IFITM10A6NMD0 228 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 FAM216BQ8N7L0 139 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 PGLYRP4Q96LB8 373 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 SCNM1Q9BWG6 230 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 BDP1A6H8Y1 2624 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 PPOXP50336 477 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 TNFSF10P50591 281 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 HILPDAQ9Y5L2 63 aa13.97□□□□□ -0.17
SCARB2-210ENST00000638567 SMIM17P0DL12 118 aa13.96□□□□□ -0.17
SCARB2-210ENST00000638567 KHDC1LQ5JSQ8 128 aa13.96□□□□□ -0.17
SCARB2-210ENST00000638567 SNRNP40Q96DI7 357 aaKnown RBP13.96□□□□□ -0.17
SCARB2-210ENST00000638567 DIRC2Q96SL1 478 aa13.96□□□□□ -0.17
SCARB2-210ENST00000638567 IL36BQ9NZH7 164 aa13.96□□□□□ -0.17
SCARB2-210ENST00000638567 IGKV3D-15A0A087WSY6 115 aa13.96□□□□□ -0.17
SCARB2-210ENST00000638567 IGHV2OR16-5A0A0B4J2B6 119 aa13.96□□□□□ -0.17
SCARB2-210ENST00000638567 LOC389332A0A1B0GUA5 103 aa13.96□□□□□ -0.17
SCARB2-210ENST00000638567 C19orf24Q9BVV8 132 aa13.96□□□□□ -0.17
SCARB2-210ENST00000638567 MAS1LP35410 378 aa13.96□□□□□ -0.18
SCARB2-210ENST00000638567 RELBQ01201 579 aa13.96□□□□□ -0.18
SCARB2-210ENST00000638567 TCF23Q7RTU1 214 aa13.96□□□□□ -0.18
SCARB2-210ENST00000638567 LEPROTL1O95214 131 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 MOSP00540 346 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 LGALS7P47929 136 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 PMCHL1Q16048 86 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 PEAR1Q5VY43 1037 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-210ENST00000638567 RPP25LQ8N5L8 163 aaKnown RBP13.95□□□□□ -0.18
SCARB2-210ENST00000638567 COL6A6A6NMZ7 2263 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 NTN3O00634 580 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-210ENST00000638567 IGKV1-5P01602 117 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 RNF224P0DH78 156 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 MIR17HGQ75NE6 70 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 BPIFA4PQ86YQ2 179 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 HIST1H2BLQ99880 126 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 ATG101Q9BSB4 218 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 HERPUD1Q15011 391 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 WDR82Q6UXN9 313 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 MED13LQ71F56 2210 aa13.95□□□□□ -0.18
SCARB2-210ENST00000638567 DOCK10Q96BY6 2186 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 SIAH2O43255 324 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 FOXA3P55318 350 aaPredicted RBP13.94□□□□□ -0.18
SCARB2-210ENST00000638567 TMEM170AQ8WVE7 144 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 HSPB7Q9UBY9 170 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 TRBV9A0A0B4J1U6 114 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 J3KRW8 73 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 LINC00469Q8N7U9 141 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 TRBV24-1A0A075B6N3 115 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 HIST3H2BBQ8N257 126 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 WDR31Q8NA23 367 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 C9orf106Q8NAJ2 232 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 IFI27L2Q9H2X8 130 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 C1RLQ9NZP8 487 aa13.94□□□□□ -0.18
SCARB2-210ENST00000638567 PSPNO60542 156 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 LILRA1O75019 489 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 FAM27E3Q08E93 113 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 LOC102724200A0A096LPH7 203 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-210ENST00000638567 CTAG1AP78358 180 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 TIMM23BQ5SRD1 257 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 TMEM105Q8N8V8 129 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 ZNF738Q8NE65 137 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 OR9G1Q8NH87 305 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 A0A0G2JRQ6 117 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 KBTBD11-OT1A0A1B0GTJ5 212 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 CA7P43166 264 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 GFRA1P56159 465 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 TMEM116Q8NCL8 245 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 MRPL32Q9BYC8 188 aaKnown RBP13.93□□□□□ -0.18
SCARB2-210ENST00000638567 WDR83OSQ9Y284 106 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 DENND4CQ5VZ89 1909 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 ABCA4P78363 2273 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 IGKV3-7A0A075B6H7 116 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 TRAV1-1A0A0B4J248 108 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 WIPF3A6NGB9 483 aa13.93□□□□□ -0.18
SCARB2-210ENST00000638567 A0A1B0GW64 132 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 ZNF883P0CG24 379 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 NEU1Q99519 415 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 DOCK11Q5JSL3 2073 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 CEACAM1P13688 526 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 HOXA4Q00056 320 aaPredicted RBP13.92□□□□□ -0.18
SCARB2-210ENST00000638567 SRSF7Q16629 238 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCARB2-210ENST00000638567 TMEM97Q5BJF2 176 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 ZCCHC14Q8WYQ9 949 aaKnown RBP13.92□□□□□ -0.18
SCARB2-210ENST00000638567 WNT10AQ9GZT5 417 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 TBL2Q9Y4P3 447 aaKnown RBP13.92□□□□□ -0.18
SCARB2-210ENST00000638567 F5H697 171 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 Q0VFX4 171 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 ECSCRQ19T08 205 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 PYY3Q5JQD4 70 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 LINC00305Q7Z4B0 112 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 C1QL4Q86Z23 238 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 SRSF12Q8WXF0 261 aaKnown RBP13.92□□□□□ -0.18
SCARB2-210ENST00000638567 TMEM186Q96B77 213 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 HS3ST6Q96QI5 342 aa13.92□□□□□ -0.18
SCARB2-210ENST00000638567 OR9G9P0C7N8 305 aa13.91□□□□□ -0.18
SCARB2-210ENST00000638567 ATP5IP56385 69 aaPredicted RBP13.91□□□□□ -0.18
SCARB2-210ENST00000638567 RPL30P62888 115 aaKnown RBP13.91□□□□□ -0.18
SCARB2-210ENST00000638567 ZNF600Q6ZNG1 722 aa13.91□□□□□ -0.18
SCARB2-210ENST00000638567 DOPEY2Q9Y3R5 2298 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms