RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 CD3DP04234 171 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 PGAM2P15259 253 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 WT1-ASQ06250 92 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 ADAMTSL5Q6ZMM2 481 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 GTSCR1Q86UQ5 136 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 CLVS1Q8IUQ0 354 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 OR2K2Q8NGT1 345 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 C15orf40Q8WUR7 153 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 ABHD1Q96SE0 405 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 MIXL1Q9H2W2 232 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 ZC4H2Q9NQZ6 224 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 FAM212BQ9NTI7 297 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 MTFP1Q9UDX5 166 aa12.71□□□□□ -0.37
CACNA1A-259ENST00000638114 LGALS9O00182 355 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 TPPPO94811 219 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 CLEC3BP05452 202 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 SERPINE2P07093 398 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 FOLR2P14207 255 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 EDN2P20800 178 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 GPR183P32249 361 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 MECP2P51608 486 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 CD300EQ496F6 205 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 FAM106AQ4KMX7 169 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 GPHB5Q86YW7 130 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 LAX1Q8IWV1 398 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 CADM3Q8N126 398 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 LSM10Q969L4 123 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 TSC22D3Q99576 134 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 NDUFA4L2Q9NRX3 87 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 PRNDQ9UKY0 176 aa12.7□□□□□ -0.38
CACNA1A-259ENST00000638114 ZNF320A2RRD8 509 aa12.69□□□□□ -0.38
CACNA1A-259ENST00000638114 TBPP20226 339 aa12.69□□□□□ -0.38
CACNA1A-259ENST00000638114 SLC25A24Q6NUK1 477 aa12.69□□□□□ -0.38
CACNA1A-259ENST00000638114 ARRDC1Q8N5I2 433 aa12.69□□□□□ -0.38
CACNA1A-259ENST00000638114 ZNF502Q8TBZ5 544 aa12.69□□□□□ -0.38
CACNA1A-259ENST00000638114 RCHY1Q96PM5 261 aa12.69□□□□□ -0.38
CACNA1A-259ENST00000638114 ZMAT4Q9H898 229 aa12.69□□□□□ -0.38
CACNA1A-259ENST00000638114 FKBP11Q9NYL4 201 aa12.69□□□□□ -0.38
CACNA1A-259ENST00000638114 C15orf61A6NNL5 157 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 CTDSP2O14595 271 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 PI3P19957 117 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 PTBP1P26599 531 aaKnown RBP eCLIP12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 PPP5CP53041 499 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 H2BFWTQ7Z2G1 175 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 LHFPL1Q86WI0 220 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 OR5B3Q8NH48 314 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 RAB2BQ8WUD1 216 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 CACNG8Q8WXS5 425 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 MRGPRFQ96AM1 343 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 ZNF486Q96H40 463 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 SEC22AQ96IW7 307 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 TMEM56Q96MV1 263 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 THAP7Q9BT49 309 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 TMEM14BQ9NUH8 114 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 C19orf73Q9NVV2 129 aa12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 F11RQ9Y624 299 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-259ENST00000638114 HUWE1Q7Z6Z7 4374 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 DBX1A6NMT0 343 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 A8MZ25 164 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 IGKV1-39P01597 117 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 IGKV1D-39P04432 117 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 PIGPP57054 158 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 TAS2R19P59542 299 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 RND3P61587 244 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 SCGB2B2Q4G0G5 96 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 PLET1Q6UQ28 207 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 TMEM229BQ8NBD8 167 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 OR4D10Q8NGI6 311 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 OR4A16Q8NH70 328 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 VN1R17PQ8TDU5 208 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 TUBA4BQ9H853 241 aa12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 TECRQ9NZ01 308 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-259ENST00000638114 IGHV3-21A0A0B4J1V1 117 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 IGHV3-35A0A0C4DH35 117 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 TMEM213A2RRL7 107 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 A8MWP6 167 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 NOL3O60936 208 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 RAB3DO95716 219 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 CD74P04233 296 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 CBLN1P23435 193 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 MFAP2P55001 183 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 TMBIM6P55061 237 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 CD81P60033 236 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 MRPS10P82664 201 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 GUCA2BQ16661 112 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 STEAP1BQ6NZ63 245 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 CCDC59Q9P031 241 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 SELENOKQ9Y6D0 94 aa12.66□□□□□ -0.38
CACNA1A-259ENST00000638114 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
CACNA1A-259ENST00000638114 UNQ9165/PRO28630Q6UXU0 137 aa12.65□□□□□ -0.38
CACNA1A-259ENST00000638114 UXS1Q8NBZ7 420 aa12.65□□□□□ -0.38
CACNA1A-259ENST00000638114 OR1L6Q8NGR2 347 aa12.65□□□□□ -0.38
CACNA1A-259ENST00000638114 TERB2Q8NHR7 220 aa12.65□□□□□ -0.38
CACNA1A-259ENST00000638114 DYNC2LI1Q8TCX1 351 aa12.65□□□□□ -0.38
CACNA1A-259ENST00000638114 WDR89Q96FK6 387 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-259ENST00000638114 DIRAS2Q96HU8 199 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms