RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 WFDC10AQ9H1F0 79 aa13.4□□□□□ -0.26
PNKP-230ENST00000638016 DHFRP00374 187 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 CD3DP04234 171 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 CLEC3BP05452 202 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 TRAPPC2P0DI81 140 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 TRAPPC2BP0DI82 140 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 FOLR2P14207 255 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 UNQ9165/PRO28630Q6UXU0 137 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 LAX1Q8IWV1 398 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 SGPP2Q8IWX5 399 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 Q8N402 240 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 ZNF502Q8TBZ5 544 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 DYNLRB2Q8TF09 96 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 AP3S1Q92572 193 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 NDUFA4L2Q9NRX3 87 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 OR51B2Q9Y5P1 312 aa13.39□□□□□ -0.27
PNKP-230ENST00000638016 ZNF320A2RRD8 509 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 TMEM213A2RRL7 107 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 CTDSP2O14595 271 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 CD7P09564 240 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
PNKP-230ENST00000638016 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 DEFB114Q30KQ6 69 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 GDPD1Q8N9F7 314 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 OR1L8Q8NGR8 309 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
PNKP-230ENST00000638016 PLEKHA3Q9HB20 300 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 DNAH7Q8WXX0 4024 aa13.38□□□□□ -0.27
PNKP-230ENST00000638016 ZNF785A8K8V0 405 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 SERPINE2P07093 398 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 PPP5CP53041 499 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 FAAP20Q6NZ36 180 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 GPHB5Q86YW7 130 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 CLVS1Q8IUQ0 354 aaPredicted RBP13.37□□□□□ -0.27
PNKP-230ENST00000638016 SLC38A6Q8IZM9 456 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 MRGPRFQ96AM1 343 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 SEC22AQ96IW7 307 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 SRSF8Q9BRL6 282 aaKnown RBP13.37□□□□□ -0.27
PNKP-230ENST00000638016 MTFP1Q9UDX5 166 aa13.37□□□□□ -0.27
PNKP-230ENST00000638016 C15orf61A6NNL5 157 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 LGALS9O00182 355 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 FGF2P09038 288 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 PGAM2P15259 253 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 UCP3P55916 312 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 CD81P60033 236 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 TM4SF20Q53R12 229 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 RNASE10Q5GAN6 216 aaKnown RBP13.36□□□□□ -0.27
PNKP-230ENST00000638016 FAM209BQ5JX69 171 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 SLC25A24Q6NUK1 477 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 GTSCR1Q86UQ5 136 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 LHFPL1Q86WI0 220 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 LSM10Q969L4 123 aaKnown RBP13.36□□□□□ -0.27
PNKP-230ENST00000638016 CXorf58Q96LI9 332 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 MLXQ9UH92 298 aa13.36□□□□□ -0.27
PNKP-230ENST00000638016 TRBV7-1A0A0A6YYK4 115 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 OR2T8A6NH00 312 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 A8MZ25 164 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 RGS5O15539 181 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 SNAPC5O75971 98 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 CBLN1P23435 193 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 GUCA2BQ16661 112 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 SPINK9Q5DT21 86 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 LPCAT3Q6P1A2 487 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 TMEM61Q8N0U2 210 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 TP53RKQ96S44 253 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 TMEM14BQ9NUH8 114 aa13.35□□□□□ -0.27
PNKP-230ENST00000638016 F11RQ9Y624 299 aaKnown RBP13.35□□□□□ -0.27
PNKP-230ENST00000638016 A8MWP6 167 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 F8W735 103 aaPredicted RBP13.34□□□□□ -0.27
PNKP-230ENST00000638016 IFNA6P05013 189 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 PTBP1P26599 531 aaKnown RBP eCLIP13.34□□□□□ -0.27
PNKP-230ENST00000638016 PIGPP57054 158 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 HAGHQ16775 308 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
PNKP-230ENST00000638016 BTNL8Q6UX41 500 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 UXS1Q8NBZ7 420 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 OR2K2Q8NGT1 345 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 NEURL2Q9BR09 285 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 RETNQ9HD89 108 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 PRNDQ9UKY0 176 aa13.34□□□□□ -0.27
PNKP-230ENST00000638016 IGHV3OR16-8A0A075B7F1 116 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 K7EIM0 57 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 TGOLN2O43493 480 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 IGKV1-5P01602 117 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 S100GP29377 79 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 FAM106AQ4KMX7 169 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 H2BFWTQ7Z2G1 175 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 DYNC2LI1Q8TCX1 351 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 SCARB1Q8WTV0 552 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 ZNF414Q96IQ9 312 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 CHRDL1Q9BU40 450 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 TUBA4BQ9H853 241 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 ZMAT4Q9H898 229 aa13.33□□□□□ -0.28
PNKP-230ENST00000638016 DYNC2H1Q8NCM8 4307 aaKnown RBP13.32□□□□□ -0.28
PNKP-230ENST00000638016 SCAF4O95104 1147 aaKnown RBP13.32□□□□□ -0.28
PNKP-230ENST00000638016 CD74P04233 296 aa13.32□□□□□ -0.28
PNKP-230ENST00000638016 RND3P61587 244 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 339.1 ms