RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 A0A0J9YXV3 536 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 SMIM35A0A1B0GVV1 85 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ARRDC5A6NEK1 342 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 TLCD2A6NGC4 264 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 OR51F1A6NGY5 319 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 OR2T8A6NH00 312 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ZNF705GA8MUZ8 300 aaPredicted RBP2.3□□□□□ -2.04
VIM-210ENST00000637053 C4orf51C9J302 202 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 M0R381 172 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 AGPAT2O15120 278 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 TRGC2P03986 189 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 NMBP08949 121 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 CTSEP14091 401 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 CRYBB3P26998 211 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 BTCP35070 178 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 OPRM1P35372 400 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 PSMB3P49720 205 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 P2RX1P51575 399 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 NCBP2P52298 156 aaKnown RBP eCLIP2.3□□□□□ -2.04
VIM-210ENST00000637053 TMEM258P61165 79 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 RPS21P63220 83 aaKnown RBP2.3□□□□□ -2.04
VIM-210ENST00000637053 AKR1C1Q04828 323 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 DIAPH2-AS1Q14236 149 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 RRN3P1Q2M238 152 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 TDRG1Q3Y452 100 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 C1orf140Q5VVS0 124 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 NXNL2Q5VZ03 156 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 MORN5Q5VZ52 161 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 Q6AWC8 147 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 TEX43Q6ZNM6 134 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 PRNTQ86SH4 94 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 KTN1-AS1Q86SY8 53 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 MSRB3Q8IXL7 192 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 C9orf40Q8IXQ3 194 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 MKXQ8IYA7 352 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ATOH7Q8N100 152 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 KCNRGQ8N5I3 272 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 RFLNBQ8N5W9 214 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 BPIFB6Q8NFQ5 453 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 OR2T10Q8NGZ9 312 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 OR5AK2Q8NH90 309 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 RHOXF1Q8NHV9 184 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ZNF721Q8TF20 911 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ZNF431Q8TF32 576 aaPredicted RBP2.3□□□□□ -2.04
VIM-210ENST00000637053 RAB2BQ8WUD1 216 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 C15orf40Q8WUR7 153 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 C10orf82Q8WW14 230 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ZNF799Q96GE5 643 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 KCNS1Q96KK3 526 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 HIST1H4GQ99525 98 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 HIST1H2BLQ99880 126 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 NPVFQ9HCQ7 196 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ASF1BQ9NVP2 202 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 CLCF1Q9UBD9 225 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 NOP16Q9Y3C1 178 aaKnown RBP2.3□□□□□ -2.04
VIM-210ENST00000637053 FLVCR1Q9Y5Y0 555 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 HEBP2Q9Y5Z4 205 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 LINC00312Q9Y6C7 94 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ENPP4Q9Y6X5 453 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 HFM1A2PYH4 1435 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 ERVK-7P63135 1459 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 NLRP1Q9C000 1473 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 CAMTA1Q9Y6Y1 1673 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 SETD1AO15047 1707 aaKnown RBP2.3□□□□□ -2.04
VIM-210ENST00000637053 ITGB4P16144 1822 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 NOTCH4Q99466 2003 aa2.3□□□□□ -2.04
VIM-210ENST00000637053 SIGLEC1Q9BZZ2 1709 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 DNMT1P26358 1616 aaKnown RBP2.29□□□□□ -2.04
VIM-210ENST00000637053 WDR62O43379 1518 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 MAGI2Q86UL8 1455 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TRAV9-1A0A075B6T8 112 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 IGHV3OR16-12A0A075B7B8 117 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 A0A087WXM4 84 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TRAV41A0A0B4J266 112 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 IGHV1-69DA0A0B4J2H0 117 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 IGHV4-61A0A0C4DH41 118 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 IGKV1-8A0A0C4DH67 115 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 A0A0D9SG52 128 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 A8MUN3 132 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 ZNF727A8MUV8 499 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TMEM262E9PQX1 116 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TMEM250H0YL14 139 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 LST1O00453 97 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 IGHV4-39P01824 125 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 IGHV4-59P01825 116 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 HLA-DQB1P01920 261 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 H2AFZP0C0S5 128 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 LINC00032P0C843 101 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 FABP4P15090 132 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 VDAC1P21796 283 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 NFYBP25208 207 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 SDC2P34741 201 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 RPL22P35268 128 aaKnown RBP2.29□□□□□ -2.04
VIM-210ENST00000637053 CDKN2AP42771 156 aaKnown RBP2.29□□□□□ -2.04
VIM-210ENST00000637053 NMUP48645 174 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 CRADDP78560 199 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 QRFPP83859 136 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 TFF2Q03403 129 aa2.29□□□□□ -2.04
VIM-210ENST00000637053 ZNF90Q03938 601 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms