RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ZNF785A8K8V0 405 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 A8MWP6 167 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 OR11H12B2RN74 326 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 APOA1P02647 267 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 CD7P09564 240 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 OR13C7P0DN81 318 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 NAT1P18440 290 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 PTBP1P26599 531 aaKnown RBP eCLIP13.53□□□□□ -0.24
PNKP-225ENST00000636214 ANKRD55Q3KP44 614 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 ZFAND6Q6FIF0 208 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 SLC25A24Q6NUK1 477 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 SNX29P2Q8IUI4 249 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 CACNG8Q8WXS5 425 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 LSM10Q969L4 123 aaKnown RBP13.53□□□□□ -0.24
PNKP-225ENST00000636214 MARC2Q969Z3 335 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 WDR89Q96FK6 387 aaPredicted RBP13.53□□□□□ -0.24
PNKP-225ENST00000636214 TSC22D3Q99576 134 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 FXYD6Q9H0Q3 95 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 SCPEP1Q9HB40 452 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 UFC1Q9Y3C8 167 aa13.53□□□□□ -0.24
PNKP-225ENST00000636214 TMEM213A2RRL7 107 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 KRASP01116 189 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 EIF4EP06730 217 aaKnown RBP13.52□□□□□ -0.25
PNKP-225ENST00000636214 RBPMS2Q6ZRY4 209 aaKnown RBP13.52□□□□□ -0.25
PNKP-225ENST00000636214 DEFB125Q8N687 156 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 UXS1Q8NBZ7 420 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 OR10W1Q8NGF6 305 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 OR52B4Q8NGK2 314 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 ZNF502Q8TBZ5 544 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 VN1R17PQ8TDU5 208 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 FCAMRQ8WWV6 532 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 TMEM56Q96MV1 263 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 CMTM3Q96MX0 182 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 FUNDC2Q9BWH2 189 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 FKBP11Q9NYL4 201 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 PRNDQ9UKY0 176 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 OR51B2Q9Y5P1 312 aa13.52□□□□□ -0.25
PNKP-225ENST00000636214 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 EDN2P20800 178 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 RCVRNP35243 200 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 G6PCP35575 357 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 VBP1P61758 197 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 NCS1P62166 190 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 PHLDA2Q53GA4 152 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 MZT2AQ6P582 158 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 BTNL8Q6UX41 500 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 TMEM61Q8N0U2 210 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 EDA2RQ9HAV5 297 aa13.51□□□□□ -0.25
PNKP-225ENST00000636214 IGHV3-35A0A0C4DH35 117 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 FAM25AB3EWG3 89 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 FAM25CB3EWG5 89 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 FAM25GB3EWG6 89 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 TGOLN2O43493 480 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 SCAF4O95104 1147 aaKnown RBP13.5□□□□□ -0.25
PNKP-225ENST00000636214 SERPINE2P07093 398 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 RORCP51449 518 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 ZNF585BQ52M93 769 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 TM4SF20Q53R12 229 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 OR1L6Q8NGR2 347 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 OR5B3Q8NH48 314 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 IL17DQ8TAD2 202 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 GPX8Q8TED1 209 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 AP3S1Q92572 193 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 NSG2Q9Y328 171 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 SELENOKQ9Y6D0 94 aa13.5□□□□□ -0.25
PNKP-225ENST00000636214 TRAV25A0A0B4J276 109 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 OR2T8A6NH00 312 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 ELLP55199 621 aaPredicted RBP13.49□□□□□ -0.25
PNKP-225ENST00000636214 WT1-ASQ06250 92 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 SLC38A6Q8IZM9 456 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 BSCL2Q96G97 398 aaPredicted RBP13.49□□□□□ -0.25
PNKP-225ENST00000636214 WFDC10AQ9H1F0 79 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 RETNQ9HD89 108 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 NDUFA4L2Q9NRX3 87 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 FAM212BQ9NTI7 297 aaPredicted RBP13.49□□□□□ -0.25
PNKP-225ENST00000636214 C21orf62Q9NYP8 219 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
PNKP-225ENST00000636214 MLXQ9UH92 298 aa13.49□□□□□ -0.25
PNKP-225ENST00000636214 F11RQ9Y624 299 aaKnown RBP13.49□□□□□ -0.25
PNKP-225ENST00000636214 Q56UQ5 140 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 SPSB3Q6PJ21 355 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 UNQ9165/PRO28630Q6UXU0 137 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 H2BFWTQ7Z2G1 175 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 TBC1D26Q86UD7 250 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 LYSMD2Q8IV50 215 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 CADM3Q8N126 398 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 UBAC2Q8NBM4 344 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 OR4A16Q8NH70 328 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 HIPK2Q9H2X6 1198 aa13.48□□□□□ -0.25
PNKP-225ENST00000636214 IGHV3-21A0A0B4J1V1 117 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 HPGDSO60760 199 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 PGAM2P15259 253 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 ELK1P19419 428 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 LAMTOR1Q6IAA8 161 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 TMEM190Q8WZ59 177 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 ATP6V0BQ99437 205 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 FAM110AQ9BQ89 295 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 C20orf24Q9BUV8 137 aa13.47□□□□□ -0.25
PNKP-225ENST00000636214 ZNF436Q9C0F3 470 aaPredicted RBP13.47□□□□□ -0.25
PNKP-225ENST00000636214 DAZ1Q9NQZ3 744 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms