RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 RAB1CQ92928 201 aa12.75□□□□□ -0.37
CLN8-209ENST00000635970 FUT9Q9Y231 359 aa12.75□□□□□ -0.37
CLN8-209ENST00000635970 POLDIP2Q9Y2S7 368 aa12.75□□□□□ -0.37
CLN8-209ENST00000635970 CREBBPQ92793 2442 aa12.75□□□□□ -0.37
CLN8-209ENST00000635970 LRRC30A6NM36 301 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 P0C879 139 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 SELEP16581 610 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 PAX5Q02548 391 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 FFAR4Q5NUL3 377 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 DRAM1Q8N682 238 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 ZNF645Q8N7E2 425 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 TMEM37Q8WXS4 190 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 Q96MF0 132 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 IGHV3-64DA0A0J9YX35 117 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 PMS2P5A8MQ11 134 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 F6UZH7 168 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 ZNF16P17020 682 aaPredicted RBP12.74□□□□□ -0.37
CLN8-209ENST00000635970 CA6P23280 308 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 GNB2P62879 340 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 CATR1Q13166 79 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 CLEC12BQ2HXU8 276 aa12.74□□□□□ -0.37
CLN8-209ENST00000635970 NEU4Q8WWR8 484 aaPredicted RBP12.74□□□□□ -0.37
CLN8-209ENST00000635970 M0QZK8 103 aa12.73□□□□□ -0.37
CLN8-209ENST00000635970 C1orf194Q5T5A4 169 aa12.73□□□□□ -0.37
CLN8-209ENST00000635970 TGIF2LXQ8IUE1 241 aa12.73□□□□□ -0.37
CLN8-209ENST00000635970 RTL8AQ9BWD3 113 aa12.73□□□□□ -0.37
CLN8-209ENST00000635970 SLC25A22Q9H936 323 aa12.73□□□□□ -0.37
CLN8-209ENST00000635970 SAP30LQ9HAJ7 183 aa12.73□□□□□ -0.37
CLN8-209ENST00000635970 DYSFO75923 2080 aa12.73□□□□□ -0.37
CLN8-209ENST00000635970 FLNAP21333 2647 aaKnown RBP12.73□□□□□ -0.37
CLN8-209ENST00000635970 M0R143 59 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 RAB29O14966 203 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 ADH4P08319 380 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 OR10J1P30954 320 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 TNFAIP6P98066 277 aaPredicted RBP12.72□□□□□ -0.37
CLN8-209ENST00000635970 ZNF146Q15072 292 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 PRSS57Q6UWY2 283 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 BTNL3Q6UXE8 466 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 TMEM144Q7Z5S9 345 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 NPCDR1Q9BY65 106 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 KCNIP2Q9NS61 270 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 KCNIP1Q9NZI2 227 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 TRAV9-1A0A075B6T8 112 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 IGHV4-30-2A0A087WSY4 118 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 C11orf94C9JXX5 98 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 SH2D1BO14796 132 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 PAGE4O60829 102 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 COL8A2P25067 703 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 ITLN1Q8WWA0 313 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 ZNF488Q96MN9 340 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 OR2V2Q96R30 315 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 ELOVL1Q9BW60 279 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 FKBP11Q9NYL4 201 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 PXMP4Q9Y6I8 212 aa12.72□□□□□ -0.37
CLN8-209ENST00000635970 A0A1B0GWJ7 208 aa12.71□□□□□ -0.37
CLN8-209ENST00000635970 OR2H2O95918 312 aa12.71□□□□□ -0.37
CLN8-209ENST00000635970 CDC34P49427 236 aaPredicted RBP12.71□□□□□ -0.37
CLN8-209ENST00000635970 RPL15P61313 204 aaKnown RBP12.71□□□□□ -0.37
CLN8-209ENST00000635970 ERVK11-1P61568 191 aa12.71□□□□□ -0.37
CLN8-209ENST00000635970 CLEC2AQ6UVW9 174 aa12.71□□□□□ -0.37
CLN8-209ENST00000635970 LINC01551Q86U37 167 aa12.71□□□□□ -0.37
CLN8-209ENST00000635970 TRAPPC1Q9Y5R8 145 aa12.71□□□□□ -0.37
CLN8-209ENST00000635970 CR1P17927 2039 aa12.71□□□□□ -0.37
CLN8-209ENST00000635970 KIR2DL5BA0A0G2JN68 375 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 KIR2DL5BA0A0G2JPC4 375 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 MPDU1O75352 247 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 RAB4AP20338 218 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 FIP1L1Q6UN15 594 aaKnown RBP12.7□□□□□ -0.38
CLN8-209ENST00000635970 KIR2DL5AQ8N109 375 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 DTD1Q8TEA8 209 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 FAM168AQ92567 244 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 DCAF16Q9NXF7 216 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 IGHV1-69-2A0A0G2JMI3 117 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 TMEM210A6NLX4 147 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 TNFSF4P23510 183 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 IL3RAP26951 378 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 EIF4EBP1Q13541 118 aaPredicted RBP12.7□□□□□ -0.38
CLN8-209ENST00000635970 C10orf105Q8TEF2 133 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 GALMQ96C23 342 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 IL19Q9UHD0 177 aa12.7□□□□□ -0.38
CLN8-209ENST00000635970 ODAMA1E959 279 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 SNRPCP09234 159 aaKnown RBP12.69□□□□□ -0.38
CLN8-209ENST00000635970 YPEL3P61236 119 aaPredicted RBP12.69□□□□□ -0.38
CLN8-209ENST00000635970 PAFAH1B2P68402 229 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 RPP30P78346 268 aaKnown RBP12.69□□□□□ -0.38
CLN8-209ENST00000635970 PRAMEF6Q5VXH4 476 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 CIARTQ8N365 385 aaPredicted RBP12.69□□□□□ -0.38
CLN8-209ENST00000635970 HIVEP1P15822 2718 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 ZANQ9Y493 2812 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 A0A0U1RQK1 487 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 ZNF320A2RRD8 509 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 RHBDL1O75783 438 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 SCGB1D1O95968 90 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 FAM78BQ5VT40 261 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 PRR18Q8N4B5 295 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 CCL17Q92583 94 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 R3HDM4Q96D70 268 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 BPESC1Q9GZL8 116 aa12.69□□□□□ -0.38
CLN8-209ENST00000635970 PPP1R14DQ9NXH3 145 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms