RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 CGB3P0DN86 165 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 CGB7P0DN87 165 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 LOXL3P58215 753 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 FOXL1Q12952 345 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 GPHA2Q96T91 129 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 DCTN5Q9BTE1 182 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 NIT2Q9NQR4 276 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 UBE2CO00762 179 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 CT45A10P0DMU9 189 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 ZCCHC14Q8WYQ9 949 aaKnown RBP3.75□□□□□ -1.81
SCN1A-210ENST00000635776 SERTAD4Q9NUC0 356 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 JKAMPQ9P055 326 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 TECTAO75443 2155 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 SAA1P0DJI8 122 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-210ENST00000635776 CCL20P78556 96 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 UBE2G2P60604 165 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 IZUMO4Q1ZYL8 232 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 LRP11Q86VZ4 500 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 ISOC2Q96AB3 205 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 LINC00869P0C866 280 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 TPPP2P59282 170 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 ERVFC1-1P60608 527 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 MINOS1Q5TGZ0 78 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 MIC13Q5XKP0 118 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 C1orf122Q6ZSJ8 110 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 OR4X1Q8NH49 305 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 RASL11BQ9BPW5 248 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 GGTLC1Q9BX51 225 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 TRAPPC1Q9Y5R8 145 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 MINOS1-NBL1R4GNA1 71 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 A0A087X0M5 115 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 A0A1B0GX30 115 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 GATCO43716 136 aaKnown RBP3.75□□□□□ -1.81
SCN1A-210ENST00000635776 F12P00748 615 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-210ENST00000635776 IGHV1-8P0DP01 117 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 WT1P19544 449 aaPredicted RBP3.75□□□□□ -1.81
SCN1A-210ENST00000635776 HOXA5P20719 270 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 C17orf58Q2M2W7 97 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 SEM1Q6ZVN7 128 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 OR1P1Q8NH06 330 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 PAXXQ9BUH6 204 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 FOXH1O75593 365 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 HLA-DQA1P01909 254 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 FAM87AP0C7U9 286 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 TDGF1P3P51864 188 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 FAM209BQ5JX69 171 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 OR5T1Q8NG75 326 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 Q8WTZ3 238 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 DDB2Q92466 427 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 ZDHHC16Q969W1 377 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 ALPK2Q86TB3 2170 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 GCGP01275 180 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 IQCJQ1A5X6 159 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 FAM90A2PQ658T7 463 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 ACSM6Q6P461 480 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 C16orf82Q7Z2V1 217 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 OR51G1Q8NGK1 321 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 NDFIP1Q9BT67 221 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 METRNQ9UJH8 293 aa3.75□□□□□ -1.81
SCN1A-210ENST00000635776 C20orf202A1L168 122 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 WDR25Q64LD2 544 aaPredicted RBP3.74□□□□□ -1.81
SCN1A-210ENST00000635776 SSMEM1Q8WWF3 244 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 CLEC5AQ9NY25 188 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 ID4P47928 161 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 RPL23P62829 140 aaKnown RBP3.74□□□□□ -1.81
SCN1A-210ENST00000635776 EIF4EBP1Q13541 118 aaPredicted RBP3.74□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF383Q8NA42 475 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF439Q8NDP4 499 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 AAMDCQ9H7C9 122 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 H0YJW9 148 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 NDUFB4O95168 129 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 FAM106CPP0CH98 169 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 HES1Q14469 280 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 ELOBQ15370 118 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 NEUROG1Q92886 237 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 MRPL20Q9BYC9 149 aaKnown RBP3.74□□□□□ -1.81
SCN1A-210ENST00000635776 TNFRSF19Q9NS68 423 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 HIGD1AQ9Y241 93 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 CPAMD8Q8IZJ3 1885 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 DYSFO75923 2080 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 TEX50A0A1B0GTY4 177 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 MEX3AA1L020 520 aaKnown RBP3.74□□□□□ -1.81
SCN1A-210ENST00000635776 C5orf52A6NGY3 159 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF137PP52743 207 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 RAB4BP61018 213 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 PVRIGQ6DKI7 326 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 Q6ZPA2 131 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 KIR3DL3Q8N743 410 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 C5orf17Q8NAS9 161 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 SAMD10Q9BYL1 202 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 OR51M1Q9H341 326 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 OSTCQ9NRP0 149 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF586Q9NXT0 402 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 DOPEY2Q9Y3R5 2298 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 TCRBV4S1A1TA0A5B7 111 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 FAM157AC9JC47 383 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 TYMSP04818 313 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 ARL14EPLP0DKL9 152 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 RASL11AQ6T310 242 aa3.74□□□□□ -1.81
SCN1A-210ENST00000635776 TEX29Q8N6K0 151 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms