RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 MYL9P24844 172 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 ELLP55199 621 aaPredicted RBP9.43□□□□□ -0.9
LINC00339-206ENST00000634451 FXYD4P59646 89 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 GNG2P59768 71 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 ZNF66Q6ZN08 573 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 PRSS48Q7RTY5 328 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 KIR2DL5AQ8N109 375 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 UBAC2Q8NBM4 344 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 OR51H1Q8NH63 302 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 KIR2DL5BQ8NHK3 375 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 LGALS14Q8TCE9 139 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 GATAD1Q8WUU5 269 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 DAZ1Q9NQZ3 744 aaKnown RBP9.43□□□□□ -0.9
LINC00339-206ENST00000634451 NDUFB11Q9NX14 153 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 NSG2Q9Y328 171 aa9.43□□□□□ -0.9
LINC00339-206ENST00000634451 ABCA13Q86UQ4 5058 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 TRDV1A0A1B0GX56 115 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 K7EIM0 57 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 IGHV3-48P01763 117 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 CTXN2P0C2S0 81 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 SLC25A24Q6NUK1 477 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 ZNF818PQ6ZRF7 136 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 GBGT1Q8N5D6 347 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 GDPD1Q8N9F7 314 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 OR5H6Q8NGV6 325 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 QTRT1Q9BXR0 403 aaKnown RBP9.42□□□□□ -0.9
LINC00339-206ENST00000634451 DCSTAMPQ9H295 470 aa9.42□□□□□ -0.9
LINC00339-206ENST00000634451 MUC4Q99102 2169 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 TEX50A0A1B0GTY4 177 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 SLC22A5O76082 557 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 PPYP01298 95 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 CLEC2LP0C7M8 214 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 TBCEQ15813 527 aaPredicted RBP9.41□□□□□ -0.9
LINC00339-206ENST00000634451 ZNF367Q7RTV3 350 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 TMEM17Q86X19 198 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 FAM24BQ8N5W8 94 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 OR4A5Q8NH83 315 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 VN1R17PQ8TDU5 208 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 GALNT14Q96FL9 552 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 RARRES2Q99969 163 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 HINT2Q9BX68 163 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 SLC5A7Q9GZV3 580 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 CSTL1Q9H114 145 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 DAPK2Q9UIK4 370 aa9.41□□□□□ -0.9
LINC00339-206ENST00000634451 MEIS3P1A6NDR6 274 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 OR4C46A6NHA9 309 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 NDUFA4O00483 81 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 CHEK1O14757 476 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 SERPINE2P07093 398 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 TAS2R31P59538 309 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 RBMS2Q15434 407 aaKnown RBP9.4□□□□□ -0.9
LINC00339-206ENST00000634451 POU2AF1Q16633 256 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 BEST4Q8NFU0 473 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 DMBX1Q8NFW5 382 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 SLC25A38Q96DW6 304 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 BSCL2Q96G97 398 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-206ENST00000634451 RHPN1-AS1Q9BWJ2 59 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 RNF167Q9H6Y7 350 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 SMPXQ9UHP9 88 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 APLNQ9ULZ1 77 aa9.4□□□□□ -0.9
LINC00339-206ENST00000634451 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 IGHV7-4-1A0A0J9YVY3 117 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 NOTOA8MTQ0 251 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 MPTX1A8MV57 137 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 RBFOX2O43251 390 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC00339-206ENST00000634451 XRCC3O43542 346 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 HPRT1P00492 218 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
LINC00339-206ENST00000634451 CTSGP08311 255 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 TRAPPC2P0DI81 140 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 TRAPPC2BP0DI82 140 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 NQO2P16083 231 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 ARPC4P59998 168 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 Q56UQ5 140 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 AADACL3Q5VUY0 350 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 LAMTOR1Q6IAA8 161 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 VCXQ9H320 206 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 TXNL4BQ9NX01 149 aaKnown RBP9.39□□□□□ -0.91
LINC00339-206ENST00000634451 RHBDL2Q9NX52 303 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 ETV7Q9Y603 341 aa9.39□□□□□ -0.91
LINC00339-206ENST00000634451 F11RQ9Y624 299 aaKnown RBP9.39□□□□□ -0.91
LINC00339-206ENST00000634451 TRAV18A0A075B6X5 111 aa9.38□□□□□ -0.91
LINC00339-206ENST00000634451 IGLL5B9A064 214 aa9.38□□□□□ -0.91
LINC00339-206ENST00000634451 CA1P00915 261 aaPredicted RBP9.38□□□□□ -0.91
LINC00339-206ENST00000634451 RLN1P04808 185 aa9.38□□□□□ -0.91
LINC00339-206ENST00000634451 FAM90A2PQ658T7 463 aa9.38□□□□□ -0.91
LINC00339-206ENST00000634451 HOGA1Q86XE5 327 aa9.38□□□□□ -0.91
LINC00339-206ENST00000634451 CENPOQ9BU64 300 aa9.38□□□□□ -0.91
LINC00339-206ENST00000634451 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms