RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 LFNGQ8NES3 379 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 OR9G1Q8NH87 305 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 GNB4Q9HAV0 340 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 MBNL3Q9NUK0 354 aaKnown RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 PPIAL4CA0A0B4J2A2 164 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 PROP1O75360 226 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 PPIAL4GP0DN37 164 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 RANP62826 216 aaKnown RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 S100A12P80511 92 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 MBNL2Q5VZF2 373 aaKnown RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 LRTM2Q8N967 370 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 MAPK1IP1LQ8NDC0 245 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 NPIPB3Q92617 1050 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 LURAP1Q96LR2 239 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 GAFA1Q96PS6 74 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 NPCDR1Q9BY65 106 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 IFT22Q9H7X7 185 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 IGHV3-49A0A0A0MS15 119 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 IGLV1-44P01699 117 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 PRB1P04280 392 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 THBDP07204 575 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 BCL2P10415 239 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 RAB7AP51149 207 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 TIMD4Q96H15 378 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 SLC35E1Q96K37 410 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 IFI27L2Q9H2X8 130 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 TPSG1Q9NRR2 321 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 KIAA1456Q9P272 454 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 JPT1Q9UK76 154 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 ZNF320A2RRD8 509 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 SRRM4A7MD48 611 aaKnown RBP6.17□□□□□ -1.42
PKP4-217ENST00000628904 IFNL4K9M1U5 179 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 FOXH1O75593 365 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 SRSF4Q08170 494 aaKnown RBP6.17□□□□□ -1.42
PKP4-217ENST00000628904 FXYD3Q14802 87 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 TMEM41BQ5BJD5 291 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 IGFL2Q6UWQ7 119 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 ZNF561Q8N587 486 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 TRAV5A0A0B4J249 113 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 TRAV34A0A0B4J273 112 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 GNLYP22749 145 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 RND2P52198 227 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 LYZP61626 148 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 ARSJQ5FYB0 599 aaPredicted RBP6.17□□□□□ -1.42
PKP4-217ENST00000628904 ZNF600Q6ZNG1 722 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 SLC35E3Q7Z769 313 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 ELOVL1Q9BW60 279 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 HES4Q9HCC6 221 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 SEPSECSQ9HD40 501 aaKnown RBP6.17□□□□□ -1.42
PKP4-217ENST00000628904 ZNF835Q9Y2P0 537 aa6.17□□□□□ -1.42
PKP4-217ENST00000628904 RAB5AP20339 215 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 APOBEC3AP31941 199 aaPredicted RBP6.16□□□□□ -1.42
PKP4-217ENST00000628904 LSM10Q969L4 123 aaKnown RBP6.16□□□□□ -1.42
PKP4-217ENST00000628904 DOPEY1Q5JWR5 2465 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 COX7A2P2O60397 106 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 RPL8P62917 257 aaKnown RBP6.16□□□□□ -1.42
PKP4-217ENST00000628904 MEF2BQ02080 365 aaPredicted RBP6.16□□□□□ -1.42
PKP4-217ENST00000628904 OR5I1Q13606 314 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 ICAM4Q14773 271 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 TMEM241Q24JQ0 296 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 C17orf58Q2M2W7 97 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 LRRC75BQ2VPJ9 315 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 TEPPQ6URK8 271 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 ZNF66Q6ZN08 573 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 HIST1H2BAQ96A08 127 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 RITA1Q96K30 269 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 AGMATQ9BSE5 352 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 TMUB1Q9BVT8 246 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 RAB9BQ9NP90 201 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 C15orf65H3BRN8 121 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 FABP4P15090 132 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 BRWD1-AS2P59051 145 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 ERVFC1-1P60608 527 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 SPCS3P61009 180 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 HSPE1P61604 102 aaKnown RBP6.16□□□□□ -1.42
PKP4-217ENST00000628904 ZNF726P1Q15940 193 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 STPG3Q8N7X2 389 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 PARLQ9H300 379 aa6.16□□□□□ -1.42
PKP4-217ENST00000628904 METTL1Q9UBP6 276 aaKnown RBP6.16□□□□□ -1.42
PKP4-217ENST00000628904 HCFC1P51610 2035 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 H0Y8G0 127 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 SLC17A3O00476 420 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 MT-ND4LP03901 98 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 SRP19P09132 144 aaKnown RBP6.15□□□□□ -1.42
PKP4-217ENST00000628904 KLRB1Q12918 225 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 BSXQ3C1V8 233 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 SPSB3Q6PJ21 355 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 IGFL3Q6UXB1 125 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 Q6ZSR3 168 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 MIR17HGQ75NE6 70 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 OR4X1Q8NH49 305 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 CLDND2Q8NHS1 167 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 NRGNQ92686 78 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 FAM210BQ96KR6 192 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 MS4A10Q96PG2 267 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 HECTD1Q9ULT8 2610 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 IGHV3-66A0A0C4DH42 116 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 MDFIC2A0A1B0GVS7 189 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 PPP5D1E7EU14 171 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 TMEM178BH3BS89 294 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms