RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 DMBX1Q8NFW5 382 aa12.36□□□□□ -0.43
PDCD6-214ENST00000628729 MOB3AQ96BX8 217 aa12.36□□□□□ -0.43
PDCD6-214ENST00000628729 SRSF8Q9BRL6 282 aaKnown RBP12.36□□□□□ -0.43
PDCD6-214ENST00000628729 ZNF436Q9C0F3 470 aaPredicted RBP12.36□□□□□ -0.43
PDCD6-214ENST00000628729 COMMD5Q9GZQ3 224 aa12.36□□□□□ -0.43
PDCD6-214ENST00000628729 TEX50A0A1B0GTY4 177 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 DBX1A6NMT0 343 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 TGOLN2O43493 480 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■□□□ 14
PDCD6-214ENST00000628729 RPS19P39019 145 aaKnown RBP12.35□□□□□ -0.43
PDCD6-214ENST00000628729 TAS2R20P59543 309 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 HERV-K104P61576 105 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 ZNF585BQ52M93 769 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 UBE2NLQ5JXB2 153 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 SLC16A13Q7RTY0 426 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 OR52B4Q8NGK2 314 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 FCAMRQ8WWV6 532 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 AIFM2Q9BRQ8 373 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 ZNF2Q9BSG1 426 aaPredicted RBP12.35□□□□□ -0.43
PDCD6-214ENST00000628729 IFT46Q9NQC8 304 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 NSG2Q9Y328 171 aa12.35□□□□□ -0.43
PDCD6-214ENST00000628729 IGHV3-21A0A0B4J1V1 117 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 OR2T8A6NH00 312 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 PGLYRP1O75594 196 aaPredicted RBP12.34□□□□□ -0.43
PDCD6-214ENST00000628729 PMP2P02689 132 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 SERPINE2P07093 398 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 NAT1P18440 290 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 SAMD12Q8N8I0 201 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 YIPF6Q96EC8 236 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 OVOL2Q9BRP0 275 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 CHRDL1Q9BU40 450 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 GGTLC1Q9BX51 225 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 NDUFA4L2Q9NRX3 87 aa12.34□□□□□ -0.43
PDCD6-214ENST00000628729 IGHV3OR16-8A0A075B7F1 116 aa12.33□□□□□ -0.44
PDCD6-214ENST00000628729 F2RP25116 425 aa12.33□□□□□ -0.44
PDCD6-214ENST00000628729 ADMP35318 185 aa12.33□□□□□ -0.44
PDCD6-214ENST00000628729 G6PCP35575 357 aa12.33□□□□□ -0.44
PDCD6-214ENST00000628729 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.44
PDCD6-214ENST00000628729 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■■■□ 22.8
PDCD6-214ENST00000628729 TMEM69Q5SWH9 247 aa12.33□□□□□ -0.44
PDCD6-214ENST00000628729 PLET1Q6UQ28 207 aa12.33□□□□□ -0.44
PDCD6-214ENST00000628729 F11RQ9Y624 299 aaKnown RBP12.33□□□□□ -0.44
PDCD6-214ENST00000628729 K7EIM0 57 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 TMEM127O75204 238 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 KRASP01116 189 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 EIF4EP06730 217 aaKnown RBP12.32□□□□□ -0.44
PDCD6-214ENST00000628729 TRAPPC2P0DI81 140 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 TRAPPC2BP0DI82 140 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 LYSMD2Q8IV50 215 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 OR1L6Q8NGR2 347 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 VN1R17PQ8TDU5 208 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 MARC2Q969Z3 335 aa12.32□□□□□ -0.44
PDCD6-214ENST00000628729 S100A16Q96FQ6 103 aaKnown RBP12.32□□□□□ -0.44
PDCD6-214ENST00000628729 MRPL27Q9P0M9 148 aaKnown RBP12.32□□□□□ -0.44
PDCD6-214ENST00000628729 LOC102724200A0A096LPH7 203 aaPredicted RBP12.31□□□□□ -0.44
PDCD6-214ENST00000628729 TRAV25A0A0B4J276 109 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 HRH1P35367 487 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 LPAR6P43657 344 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 ELLP55199 621 aaPredicted RBP12.31□□□□□ -0.44
PDCD6-214ENST00000628729 ODF3L2Q3SX64 289 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 THOC7Q6I9Y2 204 aaKnown RBP12.31□□□□□ -0.44
PDCD6-214ENST00000628729 OR1L8Q8NGR8 309 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 OR5H2Q8NGV7 314 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 SCARB1Q8WTV0 552 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 LSM10Q969L4 123 aaKnown RBP12.31□□□□□ -0.44
PDCD6-214ENST00000628729 DGCR14Q96DF8 476 aaKnown RBP12.31□□□□□ -0.44
PDCD6-214ENST00000628729 HINT2Q9BX68 163 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 UBQLN2Q9UHD9 624 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 UFC1Q9Y3C8 167 aa12.31□□□□□ -0.44
PDCD6-214ENST00000628729 FRAS1Q86XX4 4008 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 JTBO76095 146 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 IGKV1-39P01597 117 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 IGKV1D-39P04432 117 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 TAS2R46P59540 309 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 ERVK-16P61578 105 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 SLC25A24Q6NUK1 477 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 GPX8Q8TED1 209 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 BSCL2Q96G97 398 aaPredicted RBP12.3□□□□□ -0.44
PDCD6-214ENST00000628729 C5orf66Q9H5L9 145 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 DAZ1Q9NQZ3 744 aaKnown RBP12.3□□□□□ -0.44
PDCD6-214ENST00000628729 TMEM14BQ9NUH8 114 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 THYN1Q9P016 225 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 OR51B2Q9Y5P1 312 aa12.3□□□□□ -0.44
PDCD6-214ENST00000628729 C15orf61A6NNL5 157 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 GPR31O00270 319 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 TSPAN4O14817 238 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 ZNF207O43670 478 aaKnown RBP12.29□□□□□ -0.44
PDCD6-214ENST00000628729 HLA-DMAP28067 261 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 PHLDA2Q53GA4 152 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 RBPMS2Q6ZRY4 209 aaKnown RBP12.29□□□□□ -0.44
PDCD6-214ENST00000628729 HSD17B13Q7Z5P4 300 aaPredicted RBP12.29□□□□□ -0.44
PDCD6-214ENST00000628729 CROCCP3Q8IVE0 287 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 CADM3Q8N126 398 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 IL17DQ8TAD2 202 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 BORCS5Q969J3 196 aa12.29□□□□□ -0.44
PDCD6-214ENST00000628729 SLC25A46Q96AG3 418 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms