RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 CXorf66Q5JRM2 361 aaPredicted RBP19.05■□□□□ 0.64
CAPNS1-216ENST00000628306 H2BFWTQ7Z2G1 175 aa19.05■□□□□ 0.64
CAPNS1-216ENST00000628306 DMBX1Q8NFW5 382 aa19.05■□□□□ 0.64
CAPNS1-216ENST00000628306 LSM5Q9Y4Y9 91 aaKnown RBP19.05■□□□□ 0.64
CAPNS1-216ENST00000628306 BUB1B-PAK6H3BSN5 160 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 G6PCP35575 357 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 TAS2R30P59541 319 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 ERVK-16P61578 105 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 OR2B11Q5JQS5 317 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 C10orf99Q6UWK7 81 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 OSR1Q8TAX0 266 aaPredicted RBP19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 RAB40CQ96S21 281 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 NABP2Q9BQ15 211 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 RCL1Q9Y2P8 373 aaKnown RBP19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 HILPDAQ9Y5L2 63 aa19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 DYNC2H1Q8NCM8 4307 aaKnown RBP19.04■□□□□ 0.64
CAPNS1-216ENST00000628306 LY6LH3BQJ8 138 aa19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 TAAR5O14804 337 aa19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 SCGB1D2O95969 90 aa19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 APOA2P02652 100 aa19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 ZNF767PQ75MW2 155 aa19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 SLC51BQ86UW2 128 aa19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 PDPNQ86YL7 162 aa19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 RCC1LQ96I51 464 aaKnown RBP19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 SLC35D1Q9NTN3 355 aa19.03■□□□□ 0.64
CAPNS1-216ENST00000628306 H0YJW9 148 aa19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 MED6O75586 246 aa19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 GAPDHP04406 335 aaKnown RBP19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 IL6RP08887 468 aaPredicted RBP19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 RPL12P30050 165 aaKnown RBP19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 TMEM177Q53S58 311 aa19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 MINOS1Q5TGZ0 78 aa19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 TGIF2LXQ8IUE1 241 aa19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 OR52E5Q8NH55 327 aa19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 HSPB7Q9UBY9 170 aa19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 MINOS1-NBL1R4GNA1 71 aa19.02■□□□□ 0.64
CAPNS1-216ENST00000628306 BCL2L11O43521 198 aa19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 PF4V1P10720 104 aa19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 POLR2GP62487 172 aaKnown RBP eCLIP19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 FOXRED2Q8IWF2 684 aa19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 OR4P4Q8NGL7 312 aa19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 MRPL20Q9BYC9 149 aaKnown RBP19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 TSSC4Q9Y5U2 329 aaPredicted RBP19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 WSB1Q9Y6I7 421 aa19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 RYR2Q92736 4967 aa19.01■□□□□ 0.63
CAPNS1-216ENST00000628306 KANTRA0A1W2PQU2 76 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 WRBO00258 174 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 SYNGR2O43760 224 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 AMY1AP04745 511 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 ARSJQ5FYB0 599 aaPredicted RBP19■□□□□ 0.63
CAPNS1-216ENST00000628306 TEX261Q6UWH6 196 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 ZNF429Q86V71 674 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 ARPC5LQ9BPX5 153 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 U3KQ87 197 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 SACSQ9NZJ4 4579 aa19■□□□□ 0.63
CAPNS1-216ENST00000628306 TCRBV4S1A1TA0A5B7 111 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 OOSP1A8MZH6 123 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 CRYZL1O95825 349 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 FGF2P09038 288 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 HOXD3P31249 432 aaPredicted RBP18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 CEACAM3P40198 252 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 DEFB121Q5J5C9 76 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 ETV3LQ6ZN32 361 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 LINC00482Q8N8I6 264 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 SMIM8Q96KF7 97 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 RHOVQ96L33 236 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 WWC2-AS2Q96NR7 200 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 RNF5Q99942 180 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 SLC25A31Q9H0C2 315 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 LYRM2Q9NU23 88 aaPredicted RBP18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 DPM3Q9P2X0 92 aa18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 HUWE1Q7Z6Z7 4374 aaKnown RBP18.99■□□□□ 0.63
CAPNS1-216ENST00000628306 LEUTXA8MZ59 168 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 PF4P02776 101 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 CD24P25063 80 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 HTR1DP28221 377 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 LGALS7P47929 136 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 AP2S1P53680 142 aaPredicted RBP18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 VAMP2P63027 116 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 TNFRSF9Q07011 255 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 OR2C3Q8N628 320 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 FLYWCH2Q96CP2 140 aaKnown RBP18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 B9D2Q9BPU9 175 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 WASHC3Q9Y3C0 194 aa18.98■□□□□ 0.63
CAPNS1-216ENST00000628306 MSGN1A6NI15 193 aa18.97■□□□□ 0.63
CAPNS1-216ENST00000628306 IFNA7P01567 189 aa18.97■□□□□ 0.63
CAPNS1-216ENST00000628306 RPL23AP62750 156 aaKnown RBP18.97■□□□□ 0.63
CAPNS1-216ENST00000628306 IZUMO4Q1ZYL8 232 aa18.97■□□□□ 0.63
CAPNS1-216ENST00000628306 CENPVQ7Z7K6 275 aaPredicted RBP18.97■□□□□ 0.63
CAPNS1-216ENST00000628306 PAIP2BQ9ULR5 123 aaKnown RBP18.97■□□□□ 0.63
CAPNS1-216ENST00000628306 DNAH7Q8WXX0 4024 aa18.97■□□□□ 0.63
CAPNS1-216ENST00000628306 TSC22D2O75157 780 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 PAX9P55771 341 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 UBE2KP61086 200 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 BAXQ07812 192 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 C16orf82Q7Z2V1 217 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 ZNF680Q8NEM1 530 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 OR8H1Q8NGG4 311 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 OR4A5Q8NH83 315 aa18.96■□□□□ 0.63
CAPNS1-216ENST00000628306 STOML3Q8TAV4 291 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms