RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 ZNF833PQ6ZTB9 187 aa15.32■□□□□ 0.04
CNOT9-209ENST00000627282 TMEM217Q8N7C4 229 aa15.32■□□□□ 0.04
CNOT9-209ENST00000627282 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.32■□□□□ 0.04
CNOT9-209ENST00000627282 PARP11Q9NR21 331 aa15.32■□□□□ 0.04
CNOT9-209ENST00000627282 A0A1W2PPI3 338 aa15.31■□□□□ 0.04
CNOT9-209ENST00000627282 KRBOX1C9JBD0 128 aa15.31■□□□□ 0.04
CNOT9-209ENST00000627282 HOXA3O43365 443 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-209ENST00000627282 IGHV4-59P01825 116 aa15.31■□□□□ 0.04
CNOT9-209ENST00000627282 ZP3P21754 424 aa15.31■□□□□ 0.04
CNOT9-209ENST00000627282 IL3RAP26951 378 aa15.31■□□□□ 0.04
CNOT9-209ENST00000627282 RAB5CP51148 216 aa15.31■□□□□ 0.04
CNOT9-209ENST00000627282 PXDC1Q5TGL8 231 aa15.31■□□□□ 0.04
CNOT9-209ENST00000627282 TMEM14EPQ6UXP3 125 aa15.31■□□□□ 0.04
CNOT9-209ENST00000627282 RBMS3Q6XE24 437 aaKnown RBP15.31■□□□□ 0.04
CNOT9-209ENST00000627282 CIB3Q96Q77 187 aaPredicted RBP15.31■□□□□ 0.04
CNOT9-209ENST00000627282 TENM1Q9UKZ4 2725 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 OOSP1A8MZH6 123 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 TRIM77I1YAP6 450 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 METTL15P1P0C7V9 234 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 CT45A6P0DMU7 189 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 CT45A5P0DMU8 189 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 CT45A7P0DMV0 189 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 ATP6V0CP27449 155 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 IER3P46695 156 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 SPANXN5Q5MJ07 72 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 BTNL8Q6UX41 500 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 HAPLN4Q86UW8 402 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 PIFOQ8TCI5 191 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 DTD1Q8TEA8 209 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 DUX5Q96PT3 197 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 TSNAXQ99598 290 aaKnown RBP15.3■□□□□ 0.04
CNOT9-209ENST00000627282 SSX3Q99909 188 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 QTRT1Q9BXR0 403 aaKnown RBP15.3■□□□□ 0.04
CNOT9-209ENST00000627282 SH3BGRL3Q9H299 93 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 CACFD1Q9UGQ2 172 aa15.3■□□□□ 0.04
CNOT9-209ENST00000627282 DNAJC9-AS1A6NH13 148 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 SHOXO15266 292 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 RBMXL2O75526 392 aaKnown RBP15.29■□□□□ 0.04
CNOT9-209ENST00000627282 RAB13P51153 203 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 HBG1P69891 147 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 HBG2P69892 147 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 ARL16Q0P5N6 197 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 POU2AF1Q16633 256 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 LRRC75BQ2VPJ9 315 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 FAM71F2Q6NXP2 309 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 UQCC3Q6UW78 93 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 IL34Q6ZMJ4 242 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 SSX9Q7RTT3 188 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 OR52E5Q8NH55 327 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 OR4A16Q8NH70 328 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 SSMEM1Q8WWF3 244 aa15.29■□□□□ 0.04
CNOT9-209ENST00000627282 STRAPQ9Y3F4 350 aaKnown RBP15.29■□□□□ 0.04
CNOT9-209ENST00000627282 LY86O95711 162 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 CRYZL1O95825 349 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 RELBQ01201 579 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 PDLIM3Q53GG5 364 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-209ENST00000627282 DHRS7BQ6IAN0 325 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-209ENST00000627282 CCDC144NLQ6NUI1 221 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 GNPNAT1Q96EK6 184 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-209ENST00000627282 LINC00052Q96N35 136 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 TMEM140Q9NV12 185 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 IGHV1-3A0A0C4DH29 117 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 H3BUX3 64 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 TIMM23O14925 209 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 IFNA5P01569 189 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 SPCS3P61009 180 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 PJVKQ0ZLH3 352 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 FBLN7Q53RD9 439 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 Q6ZRG5 221 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 TGIF2LXQ8IUE1 241 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 LYPD6BQ8NI32 183 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 CFHR4Q92496 578 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 OR4C12Q96R67 309 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 TNFRSF19Q9NS68 423 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 SLC35D1Q9NTN3 355 aa15.28■□□□□ 0.04
CNOT9-209ENST00000627282 CEBPZOSA8MTT3 80 aa15.27■□□□□ 0.03
CNOT9-209ENST00000627282 HRASP01112 189 aa15.27■□□□□ 0.03
CNOT9-209ENST00000627282 OR2B8PP59922 312 aa15.27■□□□□ 0.03
CNOT9-209ENST00000627282 TAGLNQ01995 201 aaKnown RBP15.27■□□□□ 0.03
CNOT9-209ENST00000627282 RTL8BQ17RB0 113 aa15.27■□□□□ 0.03
CNOT9-209ENST00000627282 VKORC1L1Q8N0U8 176 aa15.27■□□□□ 0.03
CNOT9-209ENST00000627282 OR2G3Q8NGZ4 309 aa15.27■□□□□ 0.03
CNOT9-209ENST00000627282 MRPL20Q9BYC9 149 aaKnown RBP15.27■□□□□ 0.03
CNOT9-209ENST00000627282 HRH4Q9H3N8 390 aa15.27■□□□□ 0.03
CNOT9-209ENST00000627282 CD24P25063 80 aa15.26■□□□□ 0.03
CNOT9-209ENST00000627282 F2RL1P55085 397 aa15.26■□□□□ 0.03
CNOT9-209ENST00000627282 HABP2Q14520 560 aaPredicted RBP15.26■□□□□ 0.03
CNOT9-209ENST00000627282 ZNF429Q86V71 674 aa15.26■□□□□ 0.03
CNOT9-209ENST00000627282 CCDC28AQ8IWP9 274 aa15.26■□□□□ 0.03
CNOT9-209ENST00000627282 TMEM86BQ8N661 226 aa15.26■□□□□ 0.03
CNOT9-209ENST00000627282 RHOVQ96L33 236 aa15.26■□□□□ 0.03
CNOT9-209ENST00000627282 PARD6GQ9BYG4 376 aaPredicted RBP15.26■□□□□ 0.03
CNOT9-209ENST00000627282 IGHV3-72A0A0B4J1Y9 119 aa15.25■□□□□ 0.03
CNOT9-209ENST00000627282 TRAV3A0A0B4J244 114 aa15.25■□□□□ 0.03
CNOT9-209ENST00000627282 PMS2P5A8MQ11 134 aa15.25■□□□□ 0.03
CNOT9-209ENST00000627282 UMAD1C9J7I0 102 aa15.25■□□□□ 0.03
CNOT9-209ENST00000627282 CLDN34H7C241 214 aa15.25■□□□□ 0.03
CNOT9-209ENST00000627282 IFNA17P01571 189 aa15.25■□□□□ 0.03
CNOT9-209ENST00000627282 IL6RP08887 468 aaPredicted RBP15.25■□□□□ 0.03
CNOT9-209ENST00000627282 CAMLGP49069 296 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms