RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	SIGLEC12	Q96PQ1	595 aa		11.77	□□□□□ -0.53
NRXN1-222	ENST00000625672	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.77	□□□□□ -0.53
NRXN1-222	ENST00000625672	APOM	O95445	188 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	CD160	O95971	181 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	CHCHD5	Q9BSY4	110 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	ANKRD36	A6QL64	1941 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	SRD5A1	P18405	259 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	ACP7	Q6ZNF0	438 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	OR1P1	Q8NH06	330 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	RNASE6	Q93091	150 aa	Known RBP	11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	C1QL1	O75973	258 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	FST	P19883	344 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	MBD3L1	Q8WWY6	194 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	PDCD11	Q14690	1871 aa	Known RBP	11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	TCF23	Q7RTU1	214 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	SP7	Q8TDD2	431 aa	Predicted RBP	11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	KCNS1	Q96KK3	526 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	VCX2	Q9H322	139 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	LOC390937	A0A1W2PQ73	354 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	COX5B	P10606	129 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	EFNB1	P98172	346 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	ZNF818P	Q6ZRF7	136 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	FAM169B	Q8N8A8	192 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	OR5P3	Q8WZ94	311 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	PI4KA	P42356	2102 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	ADARB2-AS1	A8MUL3	147 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	NBEAP1	P0C6P0	100 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	EGR1	P18146	543 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	CKS1B	P61024	79 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	RIPPLY2	Q5TAB7	128 aa		11.76	□□□□□ -0.53
NRXN1-222	ENST00000625672	C9orf62	Q8N4C0	152 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	DRAM1	Q8N682	238 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	OR5A1	Q8NGJ0	315 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	MIXL1	Q9H2W2	232 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	CECR9	P0C854	216 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	GCHFR	P30047	84 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	C3orf56	Q8N813	242 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	CBLN4	Q9NTU7	201 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	FER1L5	A0AVI2	2057 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	MSGN1	A6NI15	193 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	IGHV4-39	P01824	125 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	IFI27	P40305	119 aa	Predicted RBP	11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	WFDC12	Q8WWY7	111 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	HIST1H2BA	Q96A08	127 aa		11.75	□□□□□ -0.53
NRXN1-222	ENST00000625672	ARAP2	Q8WZ64	1704 aa		11.74	□□□□□ -0.53
NRXN1-222	ENST00000625672	GRIFIN	A4D1Z8	144 aa		11.74	□□□□□ -0.53
NRXN1-222	ENST00000625672	ERVK11-1	P61568	191 aa		11.74	□□□□□ -0.53
NRXN1-222	ENST00000625672	ZNF79	Q15937	498 aa		11.74	□□□□□ -0.53
NRXN1-222	ENST00000625672	TMEM91	Q6ZNR0	172 aa		11.74	□□□□□ -0.53
NRXN1-222	ENST00000625672	TRBV9	A0A0B4J1U6	114 aa		11.74	□□□□□ -0.53
NRXN1-222	ENST00000625672	GLI3	P10071	1580 aa		11.74	□□□□□ -0.53
NRXN1-222	ENST00000625672	FAM216B	Q8N7L0	139 aa		11.74	□□□□□ -0.53
NRXN1-222	ENST00000625672		A0A087WX48	190 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	APOH	P02749	345 aa	Predicted RBP	11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	ZNF585B	Q52M93	769 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	FMC1	Q96HJ9	113 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	SLC25A15	Q9Y619	301 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	EPOP	A6NHQ4	379 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	DUSP14	O95147	198 aa	Known RBP	11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	FOXA3	P55318	350 aa	Predicted RBP	11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	PRADC1	Q9BSG0	188 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	SMIM8	Q96KF7	97 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	ST20	Q9HBF5	79 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	PAX2	Q02962	417 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	FER1L6-AS1	Q8NA97	138 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	OR2K2	Q8NGT1	345 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	KIAA1551	Q9HCM1	1747 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	TRAV14DV4	A0A0A6YYC5	116 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	TRAV40	A0A0B4J280	105 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	CELA3A	P09093	270 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	IGKV1-8	A0A0C4DH67	115 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	TMEM86B	Q8N661	226 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	FAM181A	Q8N9Y4	354 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	OSR1	Q8TAX0	266 aa	Predicted RBP	11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	GATAD1	Q8WUU5	269 aa		11.73	□□□□□ -0.53
NRXN1-222	ENST00000625672	P2RY4	P51582	365 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	FAM206A	Q9NX38	181 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	PILRA	Q9UKJ1	303 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	GPR132	Q9UNW8	380 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	DOPEY2	Q9Y3R5	2298 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	NEUROG1	Q92886	237 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	TIAF1	O95411	115 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	CD24	P25063	80 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	RNF182	Q8N6D2	247 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	IFI27L2	Q9H2X8	130 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	RPL35A	P18077	110 aa	Known RBP	11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	WFIKKN1	Q96NZ8	548 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	GFI1B	Q5VTD9	330 aa		11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	MRPL20	Q9BYC9	149 aa	Known RBP	11.72	□□□□□ -0.53
NRXN1-222	ENST00000625672	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	TMEM50A	O95807	157 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	THBD	P07204	575 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	NBR2	O15453	112 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	GPX4	P36969	197 aa	Predicted RBP	11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	CA7	P43166	264 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	AMELY	Q99218	206 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms