RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 CHD3Q12873 2000 aaKnown RBP14.52□□□□□ -0.09
PCF11-207ENST00000624931 C19orf84I3L1E1 186 aa14.51□□□□□ -0.09
PCF11-207ENST00000624931 CD3EP07766 207 aa14.51□□□□□ -0.09
PCF11-207ENST00000624931 ESDP10768 282 aa14.51□□□□□ -0.09
PCF11-207ENST00000624931 RAB4AP20338 218 aa14.51□□□□□ -0.09
PCF11-207ENST00000624931 TPPP2P59282 170 aa14.51□□□□□ -0.09
PCF11-207ENST00000624931 ZNF808Q8N4W9 903 aaPredicted RBP14.51□□□□□ -0.09
PCF11-207ENST00000624931 OR52L2PQ8NGH6 319 aa14.51□□□□□ -0.09
PCF11-207ENST00000624931 MS4A10Q96PG2 267 aa14.51□□□□□ -0.09
PCF11-207ENST00000624931 DEFB108AA8MXU0 73 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 WNT9BO14905 357 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 NDUFB4O95168 129 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 HPRT1P00492 218 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 LOXP28300 417 aaPredicted RBP14.5□□□□□ -0.09
PCF11-207ENST00000624931 BRWD1-AS2P59051 145 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 Q8N7P7 452 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 OR10G8Q8NGN5 311 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 ZDHHC16Q969W1 377 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 C5orf30Q96GV9 206 aa14.5□□□□□ -0.09
PCF11-207ENST00000624931 SPTBN1Q01082 2364 aaKnown RBP14.5□□□□□ -0.09
PCF11-207ENST00000624931 TRBV9A0A0B4J1U6 114 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 RBFOX2O43251 390 aaKnown RBP eCLIP14.49□□□□□ -0.09
PCF11-207ENST00000624931 SPINT2O43291 252 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 IGHV1-46P01743 117 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 STAG3L2P0CL84 134 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 STAG3L3P0CL85 134 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 KIR2DS2P43631 304 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 CLEC12BQ2HXU8 276 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 COX19Q49B96 90 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 SGMS2Q8NHU3 365 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 UBALD1Q8TB05 177 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 ITLN1Q8WWA0 313 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 R3HDM4Q96D70 268 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 OR2V2Q96R30 315 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 ARL2-SNX15V9GYD0 113 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 MARCH11A6NNE9 402 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 PSPNO60542 156 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 TFF1P04155 84 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 SNRPCP09234 159 aaKnown RBP14.49□□□□□ -0.09
PCF11-207ENST00000624931 SELENOVP59797 346 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 MZT1Q08AG7 82 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 WDR82Q6UXN9 313 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 ZCCHC24Q8N2G6 241 aaKnown RBP14.49□□□□□ -0.09
PCF11-207ENST00000624931 CMTM2Q8TAZ6 248 aa14.49□□□□□ -0.09
PCF11-207ENST00000624931 ATP5G3P48201 142 aa14.48□□□□□ -0.09
PCF11-207ENST00000624931 ACP7Q6ZNF0 438 aa14.48□□□□□ -0.09
PCF11-207ENST00000624931 UHRF2Q96PU4 802 aa14.48□□□□□ -0.09
PCF11-207ENST00000624931 IL36BQ9NZH7 164 aa14.48□□□□□ -0.09
PCF11-207ENST00000624931 CACNA1DQ01668 2161 aa14.48□□□□□ -0.09
PCF11-207ENST00000624931 ZNF462Q96JM2 2506 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 C9JCJ5 164 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 EGR1P18146 543 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 CEBPDP49716 269 aaPredicted RBP14.47□□□□□ -0.09
PCF11-207ENST00000624931 ERVK-16P61578 105 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 MOGAT3Q86VF5 341 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 OR5T1Q8NG75 326 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 OR4A16Q8NH70 328 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 C20orf144Q9BQM9 153 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 POLR3KQ9Y2Y1 108 aaPredicted RBP14.47□□□□□ -0.09
PCF11-207ENST00000624931 PKDREJQ9NTG1 2253 aa14.47□□□□□ -0.09
PCF11-207ENST00000624931 GABRA2P47869 451 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 TNFAIP6P98066 277 aaPredicted RBP14.46□□□□□ -0.09
PCF11-207ENST00000624931 AESQ08117 197 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 RAB31Q13636 194 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 TEX38Q6PEX7 206 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 LRRC29Q8WV35 223 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 C11orf52Q96A22 123 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 COQ2Q96H96 371 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 QTRT1Q9BXR0 403 aaKnown RBP14.46□□□□□ -0.09
PCF11-207ENST00000624931 SNHG12Q9BXW3 62 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 TMEM106BQ9NUM4 274 aa14.46□□□□□ -0.09
PCF11-207ENST00000624931 FNDC10F2Z333 226 aa14.46□□□□□ -0.1
PCF11-207ENST00000624931 EDDM3BP56851 147 aa14.46□□□□□ -0.1
PCF11-207ENST00000624931 SMIM21Q3B7S5 101 aa14.46□□□□□ -0.1
PCF11-207ENST00000624931 MRGPRDQ8TDS7 321 aa14.46□□□□□ -0.1
PCF11-207ENST00000624931 CORO2AQ92828 525 aa14.46□□□□□ -0.1
PCF11-207ENST00000624931 NPVFQ9HCQ7 196 aa14.46□□□□□ -0.1
PCF11-207ENST00000624931 TRAV38-1A0A0B4J264 116 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 ZNF705FA8MVS1 300 aaPredicted RBP14.45□□□□□ -0.1
PCF11-207ENST00000624931 EREGO14944 169 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 ZNF705DP0CH99 300 aaPredicted RBP14.45□□□□□ -0.1
PCF11-207ENST00000624931 ZNF705BP0CI00 300 aaPredicted RBP14.45□□□□□ -0.1
PCF11-207ENST00000624931 AREGP15514 252 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 VDAC2P45880 294 aaPredicted RBP14.45□□□□□ -0.1
PCF11-207ENST00000624931 GPR12P47775 334 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 UBE2G2P60604 165 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 RHOBP62745 196 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 ZNF90Q03938 601 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 Q0VG73 95 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 PRAMEF5Q5TYX0 476 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 TREML4Q6UXN2 200 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 JPT1Q9UK76 154 aa14.45□□□□□ -0.1
PCF11-207ENST00000624931 TRGV10A0A0A0MS01 117 aa14.44□□□□□ -0.1
PCF11-207ENST00000624931 LINC00473A8K010 186 aa14.44□□□□□ -0.1
PCF11-207ENST00000624931 ARL14EPLP0DKL9 152 aa14.44□□□□□ -0.1
PCF11-207ENST00000624931 DUTP33316 252 aaKnown RBP14.44□□□□□ -0.1
PCF11-207ENST00000624931 ADMP35318 185 aa14.44□□□□□ -0.1
PCF11-207ENST00000624931 PPP1R35Q8TAP8 253 aa14.44□□□□□ -0.1
PCF11-207ENST00000624931 GGTLC1Q9BX51 225 aa14.44□□□□□ -0.1
PCF11-207ENST00000624931 RAB9BQ9NP90 201 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms