RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NDUFS8O00217 210 aa13.22□□□□□ -0.29
LDB3-208ENST00000623007 CDKN1AP38936 164 aa13.22□□□□□ -0.29
LDB3-208ENST00000623007 PDLIM4P50479 330 aa13.22□□□□□ -0.29
LDB3-208ENST00000623007 ELLP55199 621 aaPredicted RBP13.22□□□□□ -0.29
LDB3-208ENST00000623007 BTN1A1Q13410 526 aa13.22□□□□□ -0.29
LDB3-208ENST00000623007 ETFRF1Q6IPR1 90 aa13.22□□□□□ -0.29
LDB3-208ENST00000623007 MOB3BQ86TA1 216 aa13.22□□□□□ -0.29
LDB3-208ENST00000623007 VAX2Q9UIW0 290 aa13.22□□□□□ -0.29
LDB3-208ENST00000623007 LSM4Q9Y4Z0 139 aaKnown RBP13.22□□□□□ -0.29
LDB3-208ENST00000623007 A0A1W2PPR1 153 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 SEC14L6B5MCN3 397 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 CORTO00230 105 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 FOXH1O75593 365 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 IGHV2-5P01817 119 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 BCL2P10415 239 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 RPL29P47914 159 aaKnown RBP13.21□□□□□ -0.29
LDB3-208ENST00000623007 PSMB3P49720 205 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 TPTE2P1Q5T6R2 138 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 TMEM144Q7Z5S9 345 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 PNKDQ8N490 385 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 NANPQ8TBE9 248 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 TXNDC17Q9BRA2 123 aa13.21□□□□□ -0.29
LDB3-208ENST00000623007 COL6A6A6NMZ7 2263 aa13.21□□□□□ -0.3
LDB3-208ENST00000623007 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.3
LDB3-208ENST00000623007 A0A1W2PPV4 95 aa13.21□□□□□ -0.3
LDB3-208ENST00000623007 SCO1O75880 301 aa13.21□□□□□ -0.3
LDB3-208ENST00000623007 HABP2Q14520 560 aaPredicted RBP13.21□□□□□ -0.3
LDB3-208ENST00000623007 RHEBQ15382 184 aa13.21□□□□□ -0.3
LDB3-208ENST00000623007 ACSM6Q6P461 480 aa13.21□□□□□ -0.3
LDB3-208ENST00000623007 RPP25LQ8N5L8 163 aaKnown RBP13.21□□□□□ -0.3
LDB3-208ENST00000623007 Q8N7P7 452 aa13.21□□□□□ -0.3
LDB3-208ENST00000623007 ZNF114Q8NC26 417 aa13.21□□□□□ -0.3
LDB3-208ENST00000623007 ODF3BA8MYP8 253 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 LY6HO94772 140 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 MT-CO2P00403 227 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 RNASE2P10153 161 aaKnown RBP13.2□□□□□ -0.3
LDB3-208ENST00000623007 COX7A1P24310 79 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 CDC34P49427 236 aaPredicted RBP13.2□□□□□ -0.3
LDB3-208ENST00000623007 ARF6P62330 175 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 PRSS8Q16651 343 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 GUCA2BQ16661 112 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 CLRN3Q8NCR9 226 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 SLC35E1Q96K37 410 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 ZNF430Q9H8G1 570 aaPredicted RBP13.2□□□□□ -0.3
LDB3-208ENST00000623007 TBL2Q9Y4P3 447 aaKnown RBP13.2□□□□□ -0.3
LDB3-208ENST00000623007 RFNGQ9Y644 331 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 HIVEP3Q5T1R4 2406 aa13.2□□□□□ -0.3
LDB3-208ENST00000623007 SLC25A17O43808 307 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 CD69Q07108 199 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 DIAPH2-AS1Q14236 149 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 LCN15Q6UWW0 184 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 TMEM170AQ8WVE7 144 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 GGTLC1Q9BX51 225 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 GNG13Q9P2W3 67 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 POLR3KQ9Y2Y1 108 aaPredicted RBP13.19□□□□□ -0.3
LDB3-208ENST00000623007 SIGLEC9Q9Y336 463 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 ATRXP46100 2492 aa13.19□□□□□ -0.3
LDB3-208ENST00000623007 CRYGBP07316 175 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 CCL20P78556 96 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 HNF4GQ14541 408 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 ICAM4Q14773 271 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 PSG5Q15238 335 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 ZNF726P1Q15940 193 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 PPP1R27Q86WC6 154 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 OR1L6Q8NGR2 347 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 IGFBPL1Q8WX77 278 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 RNF2Q99496 336 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 VSIRQ9H7M9 311 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 PXMP4Q9Y6I8 212 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 TET2Q6N021 2002 aaPredicted RBP13.18□□□□□ -0.3
LDB3-208ENST00000623007 IGHV2-70DA0A0C4DH43 119 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 A0A1W2PPI3 338 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 C9JQL5 133 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 SNRNP70P08621 437 aaKnown RBP13.18□□□□□ -0.3
LDB3-208ENST00000623007 SRP19P09132 144 aaKnown RBP13.18□□□□□ -0.3
LDB3-208ENST00000623007 RPL27AP46776 148 aaKnown RBP13.18□□□□□ -0.3
LDB3-208ENST00000623007 LGALS4P56470 323 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 RHOBP62745 196 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 PAX2Q02962 417 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 PNRC1Q12796 327 aaPredicted RBP13.18□□□□□ -0.3
LDB3-208ENST00000623007 HAGHQ16775 308 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 ARSJQ5FYB0 599 aaPredicted RBP13.18□□□□□ -0.3
LDB3-208ENST00000623007 SLC35E3Q7Z769 313 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 C22orf15Q8WYQ4 148 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 RAB24Q969Q5 203 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 CCL19Q99731 98 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 MGST2Q99735 147 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 LPAR2Q9HBW0 351 aa13.18□□□□□ -0.3
LDB3-208ENST00000623007 MALRD1Q5VYJ5 2156 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 A0A1B0GV50 99 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 TMEM250H0YL14 139 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 PAX6P26367 422 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 B2MP61769 119 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 FAM74A3Q4VXF1 159 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 NIPSNAP3BQ9BS92 247 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 SMCO4Q9NRQ5 59 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 PRELID1Q9Y255 219 aa13.17□□□□□ -0.3
LDB3-208ENST00000623007 ZFP92A6NM28 416 aa13.16□□□□□ -0.3
LDB3-208ENST00000623007 B4DEV8 164 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms