RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 KRTAP10-9P60411 292 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 H1FOOQ8IZA3 346 aaPredicted RBP7.45□□□□□ -1.22
HDAC9-229ENST00000622668 KIR3DL3Q8N743 410 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 OR4P4Q8NGL7 312 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 RPUSD4Q96CM3 377 aaKnown RBP7.45□□□□□ -1.22
HDAC9-229ENST00000622668 NPVFQ9HCQ7 196 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 BOLA2-SMG1P6H3BVE0 249 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 MIDNQ504T8 468 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 SLC51BQ86UW2 128 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 C15orf54Q8N8G6 183 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 RNF141Q8WVD5 230 aa7.45□□□□□ -1.22
HDAC9-229ENST00000622668 IGHV4-38-2P0DP08 117 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 MYOD1P15172 320 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 MPZP25189 248 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 CX3CL1P78423 397 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 KIAA0141Q14154 515 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-229ENST00000622668 C5orf64Q2M2E5 130 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 KLF17Q5JT82 389 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-229ENST00000622668 CCDC28AQ8IWP9 274 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 FAM216AQ8WUB2 273 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 NCOA6Q14686 2063 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-229ENST00000622668 TRBV6-7A0A0A0MS04 114 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 CDC34P49427 236 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-229ENST00000622668 DYNLT3P51808 116 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 DLX6P56179 175 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 PRDM13Q9H4Q3 707 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 GPR132Q9UNW8 380 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 ANKRD17O75179 2603 aaKnown RBP7.44□□□□□ -1.22
HDAC9-229ENST00000622668 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 IGHV2-70P01814 119 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 CD1BP29016 333 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 SELENOTP62341 195 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 PSG5Q15238 335 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 LDLRAD3Q86YD5 345 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 TVP23CQ96ET8 276 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 AKIP1Q9NQ31 210 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 ZNF292O60281 2723 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 RANP62826 216 aaKnown RBP7.44□□□□□ -1.22
HDAC9-229ENST00000622668 ADIRFQ15847 76 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 C5orf24Q7Z6I8 188 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 WDR86Q86TI4 376 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 BEND2Q8NDZ0 799 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 OR10G4Q8NGN3 311 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 OR10G9Q8NGN4 311 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 OR10G7Q8NGN6 311 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 OR10J6PQ8NGY7 276 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 RBKSQ9H477 322 aa7.44□□□□□ -1.22
HDAC9-229ENST00000622668 ZNF430Q9H8G1 570 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-229ENST00000622668 IGKV1D-13A0A0B4J2D9 117 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 SLC31A2O15432 143 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 MPC2O95563 127 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 IGKV1-13P0DP09 117 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 HIST1H1EP10412 219 aaKnown RBP7.43□□□□□ -1.22
HDAC9-229ENST00000622668 RSPO1Q2MKA7 263 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-229ENST00000622668 TECRQ9NZ01 308 aaKnown RBP7.43□□□□□ -1.22
HDAC9-229ENST00000622668 HELTA6NFD8 242 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 MELTFP08582 738 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 SOHLH1Q5JUK2 328 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 LRRC75A-AS1Q8N1F1 130 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 ZNF485Q8NCK3 441 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 DUXBA0A1W2PPF3 345 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 H3BTX0 84 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 C11orf87Q6NUJ2 197 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 BPIFA4PQ86YQ2 179 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 BAP18Q8IXM2 172 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 CTSZQ9UBR2 303 aa7.43□□□□□ -1.22
HDAC9-229ENST00000622668 MUC22E2RYF6 1773 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-229ENST00000622668 SULT1A1P50225 295 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 TNFRSF9Q07011 255 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 C15orf32Q32M92 178 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 ZNF585BQ52M93 769 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 TMUB2Q71RG4 321 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 CD8AP01732 235 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 DUTP33316 252 aaKnown RBP7.42□□□□□ -1.22
HDAC9-229ENST00000622668 SPRNQ5BIV9 151 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 TOR2AQ5JU69 321 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 SLC25A48Q6ZT89 311 aaKnown RBP7.42□□□□□ -1.22
HDAC9-229ENST00000622668 KLHDC1Q8N7A1 406 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 NOL4LQ96MY1 436 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-229ENST00000622668 TP53RKQ96S44 253 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 RNF2Q99496 336 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 FBXL17Q9UF56 701 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 SERTM2A0A1B0GWG4 89 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 RPL7P18124 248 aaKnown RBP7.42□□□□□ -1.22
HDAC9-229ENST00000622668 EFNB1P98172 346 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 LDLRAD2Q5SZI1 272 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 TMEM78Q5T7P6 136 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 Q6P435 159 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 TEX45Q8NA69 505 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 ZNF581Q9P0T4 197 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 VPREB3Q9UKI3 123 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 BOLA1Q9Y3E2 137 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 EML6Q6ZMW3 1958 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 DOCK11Q5JSL3 2073 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 PCNX3Q9H6A9 2034 aa7.42□□□□□ -1.22
HDAC9-229ENST00000622668 LY6G6DO95868 133 aa7.41□□□□□ -1.22
HDAC9-229ENST00000622668 HIST1H1AQ02539 215 aaPredicted RBP7.41□□□□□ -1.22
HDAC9-229ENST00000622668 LOXL1Q08397 574 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms