RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ASCL3Q9NQ33 180 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 ARL2-SNX15V9GYD0 113 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 SPG11Q96JI7 2443 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 SLC17A3O00476 420 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 UBE2CO00762 179 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 RND2P52198 227 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 Q6ZS49 121 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 MBD3L1Q8WWY6 194 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 TXNDC17Q9BRA2 123 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 HIF1ANQ9NWT6 349 aa10.72□□□□□ -0.69
MSH6-215ENST00000622629 CDH23Q9H251 3354 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 SCO2A0A1W2PP80 73 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 MLNRO43193 412 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 CGAP01215 116 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 CBLN1P23435 193 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 DUTP33316 252 aaKnown RBP10.71□□□□□ -0.69
MSH6-215ENST00000622629 ZNF585BQ52M93 769 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 DOLPP1Q86YN1 238 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 SFRP2Q96HF1 295 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 ARL3P36405 182 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 OR2D3Q8NGH3 330 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 HSPB9Q9BQS6 159 aa10.71□□□□□ -0.69
MSH6-215ENST00000622629 H3BTX0 84 aa10.71□□□□□ -0.7
MSH6-215ENST00000622629 KRTCAP3Q53RY4 240 aa10.71□□□□□ -0.7
MSH6-215ENST00000622629 NPIPB3Q92617 1050 aa10.71□□□□□ -0.7
MSH6-215ENST00000622629 RNF2Q99496 336 aa10.71□□□□□ -0.7
MSH6-215ENST00000622629 KBTBD11-OT1A0A1B0GTJ5 212 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 ZNF729A6NN14 1252 aaPredicted RBP10.7□□□□□ -0.7
MSH6-215ENST00000622629 TCAPO15273 167 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 TMEM183BQ1AE95 376 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 COQ2Q96H96 371 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 PRRC2CQ9Y520 2896 aaKnown RBP10.7□□□□□ -0.7
MSH6-215ENST00000622629 PIEZO2Q9H5I5 2752 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 LINC00473A8K010 186 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 CSN3P07498 182 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 C1QTNF9P0C862 333 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 CD40P25942 277 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 Q56UQ5 140 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 OR2T6Q8NHC8 308 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 COA4Q9NYJ1 87 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 DMRT1Q9Y5R6 373 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 CEACAM1P13688 526 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 FOLR2P14207 255 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 CCL3L1P16619 93 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 DDTP30046 118 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 RPL27AP46776 148 aaKnown RBP10.7□□□□□ -0.7
MSH6-215ENST00000622629 MMDQ15546 238 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 IBA57Q5T440 356 aaKnown RBP10.7□□□□□ -0.7
MSH6-215ENST00000622629 EML6Q6ZMW3 1958 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 TRBV6-6A0A0A6YYG2 114 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 SFTPCP11686 197 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 NUBP1P53384 320 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 PAX9P55771 341 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 OR5I1Q13606 314 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 OR4F17Q8NGA8 305 aa10.7□□□□□ -0.7
MSH6-215ENST00000622629 MALRD1Q5VYJ5 2156 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 SAA2-SAA4A0A096LPE2 208 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 SAA2P0DJI9 122 aaPredicted RBP10.69□□□□□ -0.7
MSH6-215ENST00000622629 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 HIST1H1BP16401 226 aaKnown RBP10.69□□□□□ -0.7
MSH6-215ENST00000622629 RPL11P62913 178 aaKnown RBP10.69□□□□□ -0.7
MSH6-215ENST00000622629 SCNM1Q9BWG6 230 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 MRPL18Q9H0U6 180 aaKnown RBP10.69□□□□□ -0.7
MSH6-215ENST00000622629 NCOR2Q9Y618 2525 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 VENTXO95231 258 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 TMEM14EPQ6UXP3 125 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 TMEM183AQ8IXX5 376 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 FAM122AQ96E09 287 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 IMMP2LQ96T52 175 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 SFXN3Q9BWM7 321 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 MRPL37Q9BZE1 423 aaKnown RBP10.69□□□□□ -0.7
MSH6-215ENST00000622629 DNAJC4Q9NNZ3 241 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 RNF224P0DH78 156 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 COL8A1P27658 744 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 PRB3Q04118 309 aaPredicted RBP10.69□□□□□ -0.7
MSH6-215ENST00000622629 PEAR1Q5VY43 1037 aaPredicted RBP10.69□□□□□ -0.7
MSH6-215ENST00000622629 CD177Q8N6Q3 437 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 SSBP3Q9BWW4 388 aaPredicted RBP10.69□□□□□ -0.7
MSH6-215ENST00000622629 WDR83OSQ9Y284 106 aa10.69□□□□□ -0.7
MSH6-215ENST00000622629 YPEL1O60688 119 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 HNRNPA3P51991 378 aaKnown RBP10.68□□□□□ -0.7
MSH6-215ENST00000622629 ZNF137PP52743 207 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 CENPWQ5EE01 88 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 MMD2Q8IY49 270 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 PERPQ96FX8 193 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 YPEL2Q96QA6 119 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 TMEM131Q92545 1883 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 GNB2P62879 340 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 ASCL5Q7RTU5 278 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 FAM222BQ8WU58 562 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 TRAV1-1A0A0B4J248 108 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 PGPA6NDG6 321 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 SRRM5B3KS81 715 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 IGKV1-39P01597 117 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 IGKV1D-39P04432 117 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 MIR17HGQ75NE6 70 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 WDR86Q86TI4 376 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 KLHDC1Q8N7A1 406 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 OR4C13Q8NGP0 309 aa10.68□□□□□ -0.7
MSH6-215ENST00000622629 RAB1CQ92928 201 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms