RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 C19orf25Q9UFG5 118 aaPredicted RBP6.63□□□□□ -1.35
VPS11-209ENST00000622309 V9GYV3 84 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 KMT2EQ8IZD2 1858 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 RTTNQ86VV8 2226 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 TDRD6O60522 2096 aaKnown RBP6.62□□□□□ -1.35
VPS11-209ENST00000622309 H0YGG7 62 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 RER1O15258 196 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 PGLYRP1O75594 196 aaPredicted RBP6.62□□□□□ -1.35
VPS11-209ENST00000622309 EML2O95834 649 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 F2RP25116 425 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 CYB561P49447 251 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 PIGYQ3MUY2 71 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 ZNF542PQ5EBM4 170 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 TMEM211Q6ICI0 200 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 Q6ZRM9 215 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 SHISA6Q6ZSJ9 500 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 OR10X1Q8NGY0 326 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 PATE1Q8WXA2 126 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 FGF22Q9HCT0 170 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 TNFRSF19Q9NS68 423 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 JPT1Q9UK76 154 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 TRAV38-1A0A0B4J264 116 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 PSG2P11465 335 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 GNG4P50150 75 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 RPL31P62899 125 aaKnown RBP6.62□□□□□ -1.35
VPS11-209ENST00000622309 TFF3Q07654 80 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 RNPS1Q15287 305 aaKnown RBP6.62□□□□□ -1.35
VPS11-209ENST00000622309 FAM162BQ5T6X4 162 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 SPATA31B1PQ5VZV4 182 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 CFAP54Q96N23 3096 aa6.62□□□□□ -1.35
VPS11-209ENST00000622309 ARHGEF17Q96PE2 2063 aaPredicted RBP6.62□□□□□ -1.35
VPS11-209ENST00000622309 IGKV1D-13A0A0B4J2D9 117 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 K7ESF4 209 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 TNFSF14O43557 240 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 PDCD6O75340 191 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 DHRS3O75911 302 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 LEPROTL1O95214 131 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 IGKV1-13P0DP09 117 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 FXYD3Q14802 87 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 CRIP3Q6Q6R5 217 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 NPCDR1Q9BY65 106 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 OR2D2Q9H210 308 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 FGF21Q9NSA1 209 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 KCNS2Q9ULS6 477 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 ZNF835Q9Y2P0 537 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 F5H5K5 113 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 RPS16P62249 146 aaKnown RBP6.61□□□□□ -1.35
VPS11-209ENST00000622309 PLCXD2Q0VAA5 305 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 TMEM196Q5HYL7 178 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 SFTPA2Q8IWL1 248 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 OSR2Q8N2R0 312 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 SMRP1Q8NCR6 262 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 ZNF418Q8TF45 676 aaPredicted RBP6.61□□□□□ -1.35
VPS11-209ENST00000622309 DUSP23Q9BVJ7 150 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 RALYQ9UKM9 306 aaKnown RBP6.61□□□□□ -1.35
VPS11-209ENST00000622309 TECTAO75443 2155 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 CACNA1AO00555 2505 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 ATG2AQ2TAZ0 1938 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 KLK10O43240 276 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 OR7C1O76099 320 aaPredicted RBP6.61□□□□□ -1.35
VPS11-209ENST00000622309 COX8AP10176 69 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 CDAP32320 146 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 CLRN1P58418 232 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 RPL8P62917 257 aaKnown RBP6.61□□□□□ -1.35
VPS11-209ENST00000622309 GRB2P62993 217 aaKnown RBP6.61□□□□□ -1.35
VPS11-209ENST00000622309 GAGE5Q13069 117 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 GAGE6Q13070 117 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 ANXA2RQ3ZCQ2 193 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 SAMD5Q5TGI4 173 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 SSX8Q7RTT4 187 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 RNF183Q96D59 192 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 MAP1LC3CQ9BXW4 147 aa6.61□□□□□ -1.35
VPS11-209ENST00000622309 KIAA1549Q9HCM3 1950 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 URB1O60287 2271 aaKnown RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 TGFBR3LH3BV60 316 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 ATP5IP56385 69 aaPredicted RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 PRSS12P56730 875 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 CEACAM16Q2WEN9 425 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 NRN1LQ496H8 165 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 SPATA46Q5T0L3 261 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 INO80CQ6PI98 192 aaPredicted RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 Q6ZSR6 202 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 NUDT22Q9BRQ3 303 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 NXF5Q9H1B4 397 aaKnown RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 C1RLQ9NZP8 487 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 OR1A1Q9P1Q5 309 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 LY96Q9Y6Y9 160 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 TNRC6AQ8NDV7 1962 aaKnown RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 C9JCJ5 164 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 MS4A18H0YCH9 400 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 CRXO43186 299 aaPredicted RBP6.6□□□□□ -1.35
VPS11-209ENST00000622309 AGFG2O95081 481 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 ARL14EPLP0DKL9 152 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 EDDM3BP56851 147 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 MS4A18Q3C1V0 323 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 TIGITQ495A1 244 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 TIMM23BQ5SRD1 257 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 TMEM14EPQ6UXP3 125 aa6.6□□□□□ -1.35
VPS11-209ENST00000622309 C2orf91Q6ZV80 131 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms