RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SERPINA1P01009 418 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 IGHV1-69P01742 117 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 ISG15P05161 165 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 HLA-DQB2P05538 268 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 MYL12AP19105 171 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 MAGEA12P43365 314 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 SLCO1A2P46721 670 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 OR4D2P58180 307 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 RANP62826 216 aaKnown RBP2.18□□□□□ -2.06
CPNE3-213ENST00000622183 ZNF181Q2M3W8 571 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 PLPPR5Q32ZL2 321 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 ACSM3Q53FZ2 586 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 TNFAIP8L3Q5GJ75 292 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 FAM78BQ5VT40 261 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 CD200R1LQ6Q8B3 271 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 SBSNQ6UWP8 590 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 RASSF6Q6ZTQ3 369 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 SLC36A1Q7Z2H8 476 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 ANGPTL5Q86XS5 388 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 LRRC18Q8N456 261 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 STX19Q8N4C7 294 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 TMEM203Q969S6 136 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 SLC35G5Q96KT7 338 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 PPP1R2P1Q96PQ5 205 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 OR52B2Q96RD2 323 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 GGACTQ9BVM4 153 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 KLK5Q9Y337 293 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-213ENST00000622183 MED23Q9ULK4 1368 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 POLA1P09884 1462 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-213ENST00000622183 FANCD2Q9BXW9 1451 aa2.18□□□□□ -2.06
CPNE3-213ENST00000622183 FMN1Q68DA7 1419 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 LMTK2Q8IWU2 1503 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 BCORL1Q5H9F3 1711 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 PHIPQ8WWQ0 1821 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.17□□□□□ -2.06
CPNE3-213ENST00000622183 EVPLLA8MZ36 301 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 BHLHE40O14503 412 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 OR2B3O76000 313 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 FAM107AO95990 144 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 IFNA21P01568 189 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 REG1AP05451 166 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 HTR1AP08908 422 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 GPX2P18283 190 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 SDC4P31431 198 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 TCL1AP56279 114 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 AESQ08117 197 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.17□□□□□ -2.06
CPNE3-213ENST00000622183 C9orf64Q5T6V5 341 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 C2orf91Q6ZV80 131 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 KRTAP13-1Q8IUC0 172 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 DAND5Q8N907 189 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 CNEP1R1Q8N9A8 125 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 OR1M1Q8NGA1 313 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 OR8J3Q8NGG0 315 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 PPP3R2Q96LZ3 170 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 SERPINI1Q99574 410 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 HOPXQ9BPY8 73 aaPredicted RBP2.17□□□□□ -2.06
CPNE3-213ENST00000622183 AIF1LQ9BQI0 150 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 ZNF471Q9BX82 626 aaPredicted RBP2.17□□□□□ -2.06
CPNE3-213ENST00000622183 CCDC90BQ9GZT6 254 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 SPANXA1Q9NS26 97 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 TONSLQ96HA7 1378 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 ABCC12Q96J65 1359 aa2.17□□□□□ -2.06
CPNE3-213ENST00000622183 TCOF1Q13428 1488 aaKnown RBP2.17□□□□□ -2.06
CPNE3-213ENST00000622183 N4BP2Q86UW6 1770 aaPredicted RBP2.17□□□□□ -2.06
CPNE3-213ENST00000622183 NLRP1Q9C000 1473 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 PRORSD1PA6NEY8 169 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 TMEM235A6NFC5 223 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 KNCNA6PVL3 124 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 DISC1C4P0D8 188 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 UBE2L6O14933 153 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 DCTN3O75935 186 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 APOMO95445 188 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 CST2P09228 141 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 CRYBA4P53673 196 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 RPL19P84098 196 aaKnown RBP2.16□□□□□ -2.06
CPNE3-213ENST00000622183 EMX2Q04743 252 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 RSU1Q15404 277 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 GRK1Q15835 563 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 LGALS9BQ3B8N2 356 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 C1orf194Q5T5A4 169 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 C1orf195Q5TG92 126 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 TRIQKQ629K1 86 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 LGALS9CQ6DKI2 356 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 GRINAQ7Z429 371 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 TRAPPC5Q8IUR0 188 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 GPR32P1Q8NGA4 272 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 RNASE6Q93091 150 aaKnown RBP2.16□□□□□ -2.06
CPNE3-213ENST00000622183 C12orf43Q96C57 262 aaKnown RBP2.16□□□□□ -2.06
CPNE3-213ENST00000622183 DGCR14Q96DF8 476 aaKnown RBP2.16□□□□□ -2.06
CPNE3-213ENST00000622183 SFRP2Q96HF1 295 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 C14orf144Q96I85 54 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 OR51I2Q9H344 312 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 DICER1Q9UPY3 1922 aaKnown RBP2.16□□□□□ -2.06
CPNE3-213ENST00000622183 ANKRD26Q9UPS8 1709 aa2.16□□□□□ -2.06
CPNE3-213ENST00000622183 GRIN2BQ13224 1484 aa2.15□□□□□ -2.06
CPNE3-213ENST00000622183 MBD5Q9P267 1494 aa2.15□□□□□ -2.06
CPNE3-213ENST00000622183 TRPM3Q9HCF6 1732 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms