RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TRBV9A0A0B4J1U6 114 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 NPIPB5A8MRT5 1133 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 REG1AP05451 166 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 CRYGCP07315 174 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 CTRB1P17538 263 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 TPPP2P59282 170 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 TMEM268Q5VZI3 342 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 CTRB2Q6GPI1 263 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 SLC35G3Q8N808 338 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 OR4F17Q8NGA8 305 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 OR5B3Q8NH48 314 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 OR4F4Q96R69 305 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 ALX4Q9H161 411 aaPredicted RBP11.09□□□□□ -0.63
CBWD3-217ENST00000621474 SLA2Q9H6Q3 261 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 COA4Q9NYJ1 87 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 OR51B2Q9Y5P1 312 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 DMRT1Q9Y5R6 373 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 SNAPC5O75971 98 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 TRGV3P03979 118 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 PSMB6P28072 239 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 ASAH1Q13510 395 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 KLK9Q2XQG4 91 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 ANKRD55Q3KP44 614 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 ZNF429Q86V71 674 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 OR1L8Q8NGR8 309 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 IL22RA2Q969J5 263 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 RAX2Q96IS3 184 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 OR5B12Q96R08 314 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 P2RX4Q99571 388 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 SRSF8Q9BRL6 282 aaKnown RBP11.09□□□□□ -0.63
CBWD3-217ENST00000621474 ZNF355PQ9NSJ1 428 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 KLK9Q9UKQ9 250 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 ZNF257Q9Y2Q1 563 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 KCNIP3Q9Y2W7 256 aa11.09□□□□□ -0.63
CBWD3-217ENST00000621474 NBEAL1Q6ZS30 2694 aa11.08□□□□□ -0.64
CBWD3-217ENST00000621474 NUDT19A8MXV4 375 aa11.08□□□□□ -0.64
CBWD3-217ENST00000621474 ANXA7P20073 488 aaKnown RBP11.08□□□□□ -0.64
CBWD3-217ENST00000621474 RUNX1Q01196 453 aa11.08□□□□□ -0.64
CBWD3-217ENST00000621474 FHL3Q13643 280 aa11.08□□□□□ -0.64
CBWD3-217ENST00000621474 AARDQ4LEZ3 155 aa11.08□□□□□ -0.64
CBWD3-217ENST00000621474 NMSQ5H8A3 153 aa11.08□□□□□ -0.64
CBWD3-217ENST00000621474 GPR146Q96CH1 333 aa11.08□□□□□ -0.64
CBWD3-217ENST00000621474 C20orf85Q9H1P6 137 aa11.08□□□□□ -0.64
CBWD3-217ENST00000621474 A0A0B4J2A0 478 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 SFT2D2O95562 160 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 IGHV3-11P01762 117 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 TCRBP04435 133 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 TRAPPC2P0DI81 140 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 TRAPPC2BP0DI82 140 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 VAMP1P23763 118 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 LYZL2Q7Z4W2 148 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 FAM219AQ8IW50 185 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 LRTM2Q8N967 370 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 OR4A16Q8NH70 328 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 LSM10Q969L4 123 aaKnown RBP11.07□□□□□ -0.64
CBWD3-217ENST00000621474 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 SHPKQ9UHJ6 478 aa11.07□□□□□ -0.64
CBWD3-217ENST00000621474 ST8SIA3O43173 380 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 ATG12O94817 140 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 OR4E1P0C645 316 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 ANXA3P12429 323 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 UBE2MP61081 183 aaKnown RBP11.06□□□□□ -0.64
CBWD3-217ENST00000621474 HSPE1P61604 102 aaKnown RBP11.06□□□□□ -0.64
CBWD3-217ENST00000621474 DHRS2Q13268 280 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 THOC7Q6I9Y2 204 aaKnown RBP11.06□□□□□ -0.64
CBWD3-217ENST00000621474 MRPL41Q8IXM3 137 aaKnown RBP11.06□□□□□ -0.64
CBWD3-217ENST00000621474 LINC00482Q8N8I6 264 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 RRNAD1Q96FB5 475 aaKnown RBP11.06□□□□□ -0.64
CBWD3-217ENST00000621474 IGLV11-55A0A075B6I3 123 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 C9orf170A2RU37 121 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 CCL24O00175 119 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 HLA-AP01891 365 aaKnown RBP11.06□□□□□ -0.64
CBWD3-217ENST00000621474 LGALS1P09382 135 aaKnown RBP11.06□□□□□ -0.64
CBWD3-217ENST00000621474 OR13C7P0DN81 318 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 MFAP2P55001 183 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 RHOGP84095 191 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 SPINK9Q5DT21 86 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 LGI3Q8N145 548 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 WFDC9Q8NEX5 89 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 OR11H1Q8NG94 326 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 HINT2Q9BX68 163 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 NUDT15Q9NV35 164 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 CACNG5Q9UF02 275 aa11.06□□□□□ -0.64
CBWD3-217ENST00000621474 OR2J3O76001 311 aa11.05□□□□□ -0.64
CBWD3-217ENST00000621474 PF4P02776 101 aa11.05□□□□□ -0.64
CBWD3-217ENST00000621474 HSD17B13Q7Z5P4 300 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-217ENST00000621474 NOTCH1P46531 2555 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 TRAV6A0A075B6T7 132 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 IGHV4OR15-8A0A075B7B6 117 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 A0A087WW49 117 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 FAM223BA6NKX1 122 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 MYCNOSP40205 109 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 MECP2P51608 486 aaKnown RBP11.04□□□□□ -0.64
CBWD3-217ENST00000621474 SRPXP78539 464 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 PDLIM3Q53GG5 364 aaPredicted RBP11.04□□□□□ -0.64
CBWD3-217ENST00000621474 ZNF343Q6P1L6 599 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms