RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 NBR2O15453 112 aa12.69□□□□□ -0.38
CBWD3-216ENST00000621396 MED6O75586 246 aa12.69□□□□□ -0.38
CBWD3-216ENST00000621396 VDAC2P45880 294 aaPredicted RBP12.69□□□□□ -0.38
CBWD3-216ENST00000621396 PRSS8Q16651 343 aa12.69□□□□□ -0.38
CBWD3-216ENST00000621396 TMEM170AQ8WVE7 144 aa12.69□□□□□ -0.38
CBWD3-216ENST00000621396 TSNAXQ99598 290 aaKnown RBP12.69□□□□□ -0.38
CBWD3-216ENST00000621396 SSX3Q99909 188 aa12.69□□□□□ -0.38
CBWD3-216ENST00000621396 SMR3AQ99954 134 aa12.69□□□□□ -0.38
CBWD3-216ENST00000621396 TNFRSF19Q9NS68 423 aa12.69□□□□□ -0.38
CBWD3-216ENST00000621396 CA2P00918 260 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 PIFOQ8TCI5 191 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 OOSP1A8MZH6 123 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 ACTL6BO94805 426 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 FAM106CPP0CH98 169 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 EXOSC2Q13868 293 aaKnown RBP12.68□□□□□ -0.38
CBWD3-216ENST00000621396 FAM74A1Q5RGS3 127 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 THNSL2Q86YJ6 484 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 TEX45Q8NA69 505 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 OR52E5Q8NH55 327 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 GON7Q9BXV9 100 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 HIPK2Q9H2X6 1198 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 PLEKHA3Q9HB20 300 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 NDUFA4L2Q9NRX3 87 aa12.68□□□□□ -0.38
CBWD3-216ENST00000621396 C15orf62A8K5M9 175 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 BRS3P32247 399 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 PRCDQ00LT1 54 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 WT1-ASQ06250 92 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 ZNF680Q8NEM1 530 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 NF1P21359 2839 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 FGF2P09038 288 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 SULT1A1P50225 295 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 STX12Q86Y82 276 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 Q8N6K4 173 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 ST8SIA2Q92186 375 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 SLC25A31Q9H0C2 315 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 KIAA1456Q9P272 454 aa12.67□□□□□ -0.38
CBWD3-216ENST00000621396 STRAPQ9Y3F4 350 aaKnown RBP12.67□□□□□ -0.38
CBWD3-216ENST00000621396 H3BUX3 64 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 CNIH1O95406 144 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 AREGP15514 252 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 ARHGDIBP52566 201 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 DEFB112Q30KQ8 113 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 TMEM14EPQ6UXP3 125 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 SLC51BQ86UW2 128 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 OR1L8Q8NGR8 309 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 ENY2Q9NPA8 101 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 ZNF257Q9Y2Q1 563 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 FBXO24O75426 580 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 C5orf64Q2M2E5 130 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 PDLIM3Q53GG5 364 aaPredicted RBP12.66□□□□□ -0.38
CBWD3-216ENST00000621396 MMD2Q8IY49 270 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 HSD17B11Q8NBQ5 300 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 SLA2Q9H6Q3 261 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 FKBP11Q9NYL4 201 aa12.66□□□□□ -0.38
CBWD3-216ENST00000621396 OR13C7P0DN81 318 aa12.65□□□□□ -0.38
CBWD3-216ENST00000621396 EBI3Q14213 229 aa12.65□□□□□ -0.38
CBWD3-216ENST00000621396 MLANAQ16655 118 aa12.65□□□□□ -0.38
CBWD3-216ENST00000621396 NPBQ8NG41 125 aa12.65□□□□□ -0.38
CBWD3-216ENST00000621396 OR4A5Q8NH83 315 aa12.65□□□□□ -0.38
CBWD3-216ENST00000621396 PMS2P5A8MQ11 134 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 J3QLI3 93 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 NDUFA3O95167 84 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 IGHV3-48P01763 117 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 FBP1P09467 338 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 C4BPBP20851 252 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 COMPP49747 757 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-216ENST00000621396 TAS2R30P59541 319 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 NDPQ00604 133 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 RUNX1Q01196 453 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 Q8N9W7 124 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 SLC24A4Q8NFF2 622 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 NANPQ8TBE9 248 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 CIB3Q96Q77 187 aaPredicted RBP12.64□□□□□ -0.39
CBWD3-216ENST00000621396 IFNA4P05014 189 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 RPL27AP46776 148 aaKnown RBP12.64□□□□□ -0.39
CBWD3-216ENST00000621396 KRTAP1-1Q07627 177 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 TMED6Q8WW62 240 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 SRSF12Q8WXF0 261 aaKnown RBP12.64□□□□□ -0.39
CBWD3-216ENST00000621396 RNF5Q99942 180 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 HSPB9Q9BQS6 159 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 MEGF9Q9H1U4 602 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 SH3BGRL3Q9H299 93 aa12.64□□□□□ -0.39
CBWD3-216ENST00000621396 LINC01548A6NM66 108 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 CX3CL1P78423 397 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 TUSC1Q2TAM9 212 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 HIVEP1P15822 2718 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 NPY1RP25929 384 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 SNCAP37840 140 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 SLC38A11Q08AI6 406 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 FXYD3Q14802 87 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 OR1S2Q8NGQ3 325 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 DUX5Q96PT3 197 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 FBXO7Q9Y3I1 522 aa12.63□□□□□ -0.39
CBWD3-216ENST00000621396 ANK3Q12955 4377 aaKnown RBP12.63□□□□□ -0.39
CBWD3-216ENST00000621396 IGLC7A0M8Q6 106 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 IGHV4-59P01825 116 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms