RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 EHFQ9NZC4 300 aa8.95□□□□□ -0.98
UPF3B-204ENST00000619445 RYR2Q92736 4967 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 MFSD2BA6NFX1 497 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 MARCH11A6NNE9 402 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 IGHV3-23P01764 117 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 REG1AP05451 166 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 SERPINE2P07093 398 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 CLEC2LP0C7M8 214 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 GPR183P32249 361 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 APOC4P55056 127 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 LPCAT3Q6P1A2 487 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 OR2C3Q8N628 320 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 TSPAN14Q8NG11 270 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 LSM10Q969L4 123 aaKnown RBP8.94□□□□□ -0.98
UPF3B-204ENST00000619445 MOB3AQ96BX8 217 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 TMEM56Q96MV1 263 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 GPHA2Q96T91 129 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 ZNF436Q9C0F3 470 aaPredicted RBP8.94□□□□□ -0.98
UPF3B-204ENST00000619445 DAZ1Q9NQZ3 744 aaKnown RBP8.94□□□□□ -0.98
UPF3B-204ENST00000619445 FAM212BQ9NTI7 297 aaPredicted RBP8.94□□□□□ -0.98
UPF3B-204ENST00000619445 MLXQ9UH92 298 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 TP53TG1Q9Y2A0 90 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 SACSQ9NZJ4 4579 aa8.94□□□□□ -0.98
UPF3B-204ENST00000619445 CGB1A6NKQ9 187 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 UBE2CO00762 179 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 TGOLN2O43493 480 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 S1PR2O95136 353 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 OR13C7P0DN81 318 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 GNRHRP30968 328 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 NEDD8Q15843 81 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 ZNF585BQ52M93 769 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 TMEM69Q5SWH9 247 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 BTNL8Q6UX41 500 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 C19orf35Q6ZS72 473 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 OR5H2Q8NGV7 314 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 OR6F1Q8NGZ6 308 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 OR5B3Q8NH48 314 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 CACNG8Q8WXS5 425 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 TMEM190Q8WZ59 177 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 DGCR14Q96DF8 476 aaKnown RBP8.93□□□□□ -0.98
UPF3B-204ENST00000619445 FAM110AQ9BQ89 295 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 RETNQ9HD89 108 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 PRNDQ9UKY0 176 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 ANAPC10Q9UM13 185 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 DNAH1Q9P2D7 4330 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 STARD9Q9P2P6 4700 aa8.93□□□□□ -0.98
UPF3B-204ENST00000619445 GPR31O00270 319 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 NDUFA4O00483 81 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 TSPAN4O14817 238 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 SCAF4O95104 1147 aaKnown RBP8.92□□□□□ -0.98
UPF3B-204ENST00000619445 PTHLHP12272 177 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 NAT1P18440 290 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 PRSS3P35030 304 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 TM4SF20Q53R12 229 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 SLC25A24Q6NUK1 477 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 Q6ZWC4 215 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 ZNF2Q9BSG1 426 aaPredicted RBP8.92□□□□□ -0.98
UPF3B-204ENST00000619445 WFDC10AQ9H1F0 79 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 RNF167Q9H6Y7 350 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 NDUFA4L2Q9NRX3 87 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 C21orf62Q9NYP8 219 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 F11RQ9Y624 299 aaKnown RBP8.92□□□□□ -0.98
UPF3B-204ENST00000619445 S4R3C0 116 aa8.92□□□□□ -0.98
UPF3B-204ENST00000619445 TRAV3A0A0B4J244 114 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 KIR2DL5BA0A0G2JN68 375 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 KIR2DL5BA0A0G2JPC4 375 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 TEX50A0A1B0GTY4 177 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 SMIM31A0A1B0GVY4 71 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 OR4C46A6NHA9 309 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 K7EMT4 169 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 PGLYRP1O75594 196 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-204ENST00000619445 RLN1P04808 185 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 ATF4P18848 351 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-204ENST00000619445 BMI1P35226 326 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 CMC4P56277 68 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-204ENST00000619445 UNQ9165/PRO28630Q6UXU0 137 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 WFDC3Q8IUB2 231 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 KIR2DL5AQ8N109 375 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 SAMD12Q8N8I0 201 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 KIR2DL5BQ8NHK3 375 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 CMTM3Q96MX0 182 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 C6orf62Q9GZU0 229 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-204ENST00000619445 OR51B2Q9Y5P1 312 aa8.91□□□□□ -0.98
UPF3B-204ENST00000619445 OR2T8A6NH00 312 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 C15orf62A8K5M9 175 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 KRASP01116 189 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 CD5P06127 495 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 EDN2P20800 178 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 LPAR6P43657 344 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 RFX2P48378 723 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 TAS2R20P59543 309 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 RELQ04864 619 aaPredicted RBP8.9□□□□□ -0.98
UPF3B-204ENST00000619445 WT1-ASQ06250 92 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 TMEM217Q8N7C4 229 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 OR10W1Q8NGF6 305 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 OR1P1Q8NH06 330 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 FCAMRQ8WWV6 532 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 TXN2Q99757 166 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 HINT2Q9BX68 163 aa8.9□□□□□ -0.98
UPF3B-204ENST00000619445 SCPEP1Q9HB40 452 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms