RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 CD8AP01732 235 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 TRIP6Q15654 476 aaKnown RBP12.3□□□□□ -0.44
PTPN9-206ENST00000618819 CLEC2AQ6UVW9 174 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 TRGV2A0A075B6R0 118 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 PIN1P1O15428 100 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 OR52E5Q8NH55 327 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 UBE2CO00762 179 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 CD28P10747 220 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 GHRHP01286 108 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 EGR4Q05215 589 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 C2orf82Q6UX34 121 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 ZNF721Q8TF20 911 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 TRGV3P03979 118 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 DNM1P46Q6ZS02 220 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 TDHQ8IZJ6 230 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 HIST1H2BLQ99880 126 aa12.3□□□□□ -0.44
PTPN9-206ENST00000618819 ASXL3Q9C0F0 2248 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
PTPN9-206ENST00000618819 A0A087X0K7 114 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 CD33P20138 364 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 SEC11AP67812 179 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 LAMA4Q16363 1823 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 PHLPP1O60346 1717 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 RIPPLY2Q5TAB7 128 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 Q96M66 194 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 LOC101059948A0A1B0GTJ6 334 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 ERVK11-1P61568 191 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 SRSF1Q07955 248 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTPN9-206ENST00000618819 RSPO4Q2I0M5 234 aaPredicted RBP12.29□□□□□ -0.44
PTPN9-206ENST00000618819 LCNL1Q6ZST4 164 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 COX14Q96I36 57 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 ANKRD36CQ5JPF3 1778 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 G6PC2Q9NQR9 355 aa12.29□□□□□ -0.44
PTPN9-206ENST00000618819 PF4P02776 101 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 TUBA4BQ9H853 241 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 TRBV5-7A0A0A0MS05 114 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 CELA2AP08217 269 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 TMPRSS3P57727 454 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 JPT1Q9UK76 154 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 IGHV1OR15-9A0A0B4J2B8 117 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 FXYD7P58549 80 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 IFI27L2Q9H2X8 130 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 CD7P09564 240 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 C1orf100Q5SVJ3 147 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 VWC2LB2RUY7 222 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 ZP4Q12836 540 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 LHX8Q68G74 356 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 ASPHD2Q6ICH7 369 aa12.28□□□□□ -0.44
PTPN9-206ENST00000618819 BCL6BQ8N143 479 aaPredicted RBP12.28□□□□□ -0.44
PTPN9-206ENST00000618819 SEPSECSQ9HD40 501 aaKnown RBP12.27□□□□□ -0.44
PTPN9-206ENST00000618819 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 GFRA3O60609 400 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 DXOO77932 396 aaKnown RBP12.27□□□□□ -0.45
PTPN9-206ENST00000618819 LIMS1P48059 325 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 PRB3Q04118 309 aaPredicted RBP12.27□□□□□ -0.45
PTPN9-206ENST00000618819 SHISA5Q8N114 240 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 APOBEC4Q8WW27 367 aaKnown RBP12.27□□□□□ -0.45
PTPN9-206ENST00000618819 WFDC6Q9BQY6 131 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 hDV102S1A0JD36 115 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 DRD3P35462 400 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 LHFPL6Q9Y693 200 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 SSC5DA1L4H1 1573 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 CIARTQ8N365 385 aaPredicted RBP12.27□□□□□ -0.45
PTPN9-206ENST00000618819 WFDC12Q8WWY7 111 aa12.27□□□□□ -0.45
PTPN9-206ENST00000618819 A0A1W2PPV9 198 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 CISD3P0C7P0 127 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 GTF3AQ92664 365 aaKnown RBP12.26□□□□□ -0.45
PTPN9-206ENST00000618819 C5P01031 1676 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 TRAV9-1A0A075B6T8 112 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 NCR2O95944 276 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 GLRXP35754 106 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 TMEM186Q96B77 213 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 NAPSAO96009 420 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 PHIPQ8WWQ0 1821 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 C1QAP02745 245 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 IGHV5-10-1A0A0J9YXX1 117 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 TNFSF13O75888 250 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 ZNF688P0C7X2 276 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 CLEC19AQ6UXS0 136 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 FBXL15Q9H469 300 aa12.26□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A10PA6NDY2 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A18PA6NE21 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A16PA6NEW6 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A20PA6NIJ5 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A8PA6NJQ4 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A7PA6NKC0 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A22PA8MWA6 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A12PA8MX19 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A5PA8MXJ8 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A23PA8MXZ1 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A15PP0C7V4 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A13PP0C7W8 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A14PP0C7W9 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 FAM90A24PP0C7X0 464 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 ATP5L2Q7Z4Y8 100 aa12.25□□□□□ -0.45
PTPN9-206ENST00000618819 SNRNP200O75643 2136 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms