RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ZNF318Q5VUA4 2279 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 RIF1Q5UIP0 2472 aaKnown RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 SMCO3A2RU48 225 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 MBD3L4A6NDZ8 208 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 MBD3L3A6NE82 208 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 MBD3L5A6NJ08 208 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 C15orf61A6NNL5 157 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 SRRM4A7MD48 611 aaKnown RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 PPP5D1E7EU14 171 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 MGST3O14880 152 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 TGOLN2O43493 480 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 SPRY3O43610 288 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 VENTXO95231 258 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 IFNA10P01566 189 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 IGKV1-16P04430 117 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 IL6RP08887 468 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 HNF1AP20823 631 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 DDTP30046 118 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 GCH1P30793 250 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 HOXC12P31275 282 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 CCKARP32238 428 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 CFHR2P36980 270 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 OPRK1P41145 380 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 JOSD1Q15040 202 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 EFNB3Q15768 340 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 ACOT6Q3I5F7 207 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 DNLZQ5SXM8 178 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 CST9LP1Q5W188 147 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 OR4A47Q6IF82 309 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 TMEM256Q8N2U0 113 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 ZNF664Q8N3J9 261 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 FAM216BQ8N7L0 139 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 OR2T10Q8NGZ9 312 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 MBD3L2Q8NHZ7 208 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 RNASEH2CQ8TDP1 164 aaKnown RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 ZNF503Q96F45 646 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 SDSLQ96GA7 329 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 EAF1Q96JC9 268 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 HEYLQ9NQ87 328 aaPredicted RBP3.53□□□□□ -1.84
SEC22B-202ENST00000618538 TMEM14BQ9NUH8 114 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 IDI2-AS1Q9NZ38 188 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 SPTBN2O15020 2390 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 IGLV3-9A0A075B6K5 115 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 TRAV17A0A0B4J275 112 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 TRGV8A0A0C4DH27 118 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 FAM90A9PA6NNJ1 464 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 F2Z2F3 143 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 C17orf112F2Z3M2 114 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 M0R1B8 84 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 GATCO43716 136 aaKnown RBP3.52□□□□□ -1.85
SEC22B-202ENST00000618538 CEACAM4O75871 244 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 CA2P00918 260 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 SNRPCP09234 159 aaKnown RBP3.52□□□□□ -1.85
SEC22B-202ENST00000618538 OR4A8P0C604 315 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 LINC00869P0C866 280 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 IGFBP2P18065 325 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 TIMP3P35625 211 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 THBS3P49746 956 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 MLANAQ16655 118 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 DEFB109BQ30KR1 87 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 ASPHD1Q5U4P2 390 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 MORN5Q5VZ52 161 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 STUMQ69YW2 141 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 TEX38Q6PEX7 206 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 VHLLQ6RSH7 139 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 STPG3Q8N7X2 389 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 ZNF709Q8N972 641 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 OR52E5Q8NH55 327 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 OR4A16Q8NH70 328 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 OR5R1Q8NH85 324 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 OCC1Q8TAD7 63 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 FAM222BQ8WU58 562 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 SARAFQ96BY9 339 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 ANAPC16Q96DE5 110 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 GAFA1Q96PS6 74 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 KCNIP2Q9NS61 270 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 ELOVL5Q9NYP7 299 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 PROCRQ9UNN8 238 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 WASF3Q9UPY6 502 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 PKDREJQ9NTG1 2253 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 KBTBD11-OT1A0A1B0GTJ5 212 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 A0A1B0GV90 55 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 E7EUB6 86 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 MKRN2OSH3BPM6 223 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 SLC17A3O00476 420 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 DVL1O14640 695 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 TM4SF5O14894 197 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 PDE6DO43924 150 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 IGHV1-46P01743 117 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 GATA2P23769 480 aaPredicted RBP3.52□□□□□ -1.85
SEC22B-202ENST00000618538 GCHFRP30047 84 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 SRP14P37108 136 aaKnown RBP3.52□□□□□ -1.85
SEC22B-202ENST00000618538 GNG10P50151 68 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 TRAT1Q6PIZ9 186 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 MIR17HGQ75NE6 70 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 GBGT1Q8N5D6 347 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 CISD2Q8N5K1 135 aaKnown RBP3.52□□□□□ -1.85
SEC22B-202ENST00000618538 FAM169BQ8N8A8 192 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 SFRP2Q96HF1 295 aa3.52□□□□□ -1.85
SEC22B-202ENST00000618538 OR5B12Q96R08 314 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms