RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 LINC01560Q8TB33 94 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 MARVELD3Q96A59 401 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 TRBV5-3A0A0A0MS03 114 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 CRYBB3P26998 211 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 SRIP30626 198 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 PEAR1Q5VY43 1037 aaPredicted RBP9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 CYP2G1PQ6ZSU1 146 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 DPM3Q9P2X0 92 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 TMEM131Q92545 1883 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 ATP5LO75964 103 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 VSIG10L2P0DP72 767 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
CCDC144B-208ENST00000618081 LOC390937A0A1W2PQ73 354 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 A1L4Q6 167 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 CA7P43166 264 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 PARLQ9H300 379 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 TMEM106BQ9NUM4 274 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 TRBV5-5A0A0J9YX44 114 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 OR5P3Q8WZ94 311 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 M0R381 172 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 ZG16O60844 167 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 Q96M66 194 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 C1QTNF12Q5T7M4 302 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 GPR146Q96CH1 333 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 C1QTNF9BB2RNN3 333 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 RNASE4P34096 147 aaKnown RBP9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 NPBWR2P48146 333 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 NABP2Q9BQ15 211 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 OR11H12B2RN74 326 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 TRGC2P03986 189 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 PRSS53Q2L4Q9 553 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 LEMD1Q68G75 181 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 OR11H1Q8NG94 326 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 OR10S1Q8NGN2 331 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 OR11H2Q8NH07 326 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 NEUROG1Q92886 237 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 TMEM54Q969K7 222 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 GGACTQ9BVM4 153 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 LINC00470Q9BZP3 86 aa9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 RBM38Q9H0Z9 239 aaKnown RBP9.51□□□□□ -0.89
CCDC144B-208ENST00000618081 CENPWQ5EE01 88 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 ACP7Q6ZNF0 438 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 MEGF10Q96KG7 1140 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 CENPVL1A0A0U1RR11 272 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 C8orf82Q6P1X6 216 aaPredicted RBP9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 RPRMQ9NS64 109 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 TRBV7-9A0A0J9YWB2 115 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 CSRP2Q16527 193 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 OSR1Q8TAX0 266 aaPredicted RBP9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 LOC101059948A0A1B0GTJ6 334 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 MEF2CQ06413 473 aaPredicted RBP9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 TGIF1Q15583 401 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 GATAD1Q8WUU5 269 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 PPP1R27Q86WC6 154 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 NPIPB3Q92617 1050 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 C11orf68Q9H3H3 251 aaKnown RBP9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 NPIPB9F8W1W9 429 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 NPIPB7O75200 414 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 ICAM4Q14773 271 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 LDLRAD2Q5SZI1 272 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 RARRES2Q99969 163 aa9.5□□□□□ -0.89
CCDC144B-208ENST00000618081 ZNF883P0CG24 379 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 GLIPR1P48060 266 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 ZNF506Q5JVG8 444 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 C7orf69Q9H7B7 122 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 PHLDA1Q8WV24 401 aaPredicted RBP9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 ZNF703Q9H7S9 590 aaPredicted RBP9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 A0A0G2JMZ2 1700 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 LRRC37A2A6NM11 1700 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 PEX7O00628 323 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 MOSP00540 346 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 UCP3P55916 312 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 RFLNBQ8N5W9 214 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 ZNRF1Q8ND25 227 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 FBXL7Q9UJT9 491 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 A0A1W2PRX2 142 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 HTN3P15516 51 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 SPOCK3Q9BQ16 436 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 YAE1D1Q9NRH1 226 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 GPR132Q9UNW8 380 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 FOXA2Q9Y261 457 aaPredicted RBP9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 WDR90Q96KV7 1748 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 A0A1B0GW15 77 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 RRHO14718 337 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 CRPP02741 224 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 FOXL2P58012 376 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 SOX21Q9Y651 276 aaPredicted RBP9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 TMEM42Q69YG0 159 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 Q6AWC8 147 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 ZNF818PQ6ZRF7 136 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 RNASEH2CQ8TDP1 164 aaKnown RBP9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 PLCE1Q9P212 2302 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 PLA2G10O15496 165 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 KLK2P20151 261 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 GPR183P32249 361 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 P2RY4P51582 365 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 BIVMQ86UB2 503 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 ATRXP46100 2492 aa9.49□□□□□ -0.89
CCDC144B-208ENST00000618081 IGLV1-36A0A0B4J1U3 117 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms