RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 HINT2Q9BX68 163 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 SDF2L1Q9HCN8 221 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 CXorf65A6NEN9 183 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 LYNX1G3V0Z9 82 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 LYNX1P0DP58 116 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 PLA2G5P39877 138 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 REG1BP48304 166 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 RPL8P62917 257 aaKnown RBP12.76□□□□□ -0.37
NR1H3-235ENST00000616973 RAB31Q13636 194 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 WDR25Q64LD2 544 aaPredicted RBP12.76□□□□□ -0.37
NR1H3-235ENST00000616973 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 RAB1BQ9H0U4 201 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 CBLN4Q9NTU7 201 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 TNCP24821 2201 aa12.76□□□□□ -0.37
NR1H3-235ENST00000616973 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
NR1H3-235ENST00000616973 IGLV2-23P01705 113 aa12.75□□□□□ -0.37
NR1H3-235ENST00000616973 RAB5AP20339 215 aa12.75□□□□□ -0.37
NR1H3-235ENST00000616973 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
NR1H3-235ENST00000616973 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
NR1H3-235ENST00000616973 MIC13Q5XKP0 118 aa12.75□□□□□ -0.37
NR1H3-235ENST00000616973 FAM24BQ8N5W8 94 aa12.75□□□□□ -0.37
NR1H3-235ENST00000616973 COMMD5Q9GZQ3 224 aa12.75□□□□□ -0.37
NR1H3-235ENST00000616973 RNASE2P10153 161 aaKnown RBP12.74□□□□□ -0.37
NR1H3-235ENST00000616973 RAB5BP61020 215 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 GCSAMLQ5JQS6 135 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 TMEM242Q9NWH2 141 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 MIOXQ9UGB7 285 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 A0A1W2PN81 502 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 ZNF727A8MUV8 499 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 C1orf196B1AJZ1 125 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 IGLV1-47P01700 117 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 CHRNA7P36544 502 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 PRRX1P54821 245 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 C11orf71Q6IPW1 123 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 TMEM144Q7Z5S9 345 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 NAT8Q9UHE5 227 aa12.74□□□□□ -0.37
NR1H3-235ENST00000616973 IGHV2-26A0A0B4J1V2 119 aa12.73□□□□□ -0.37
NR1H3-235ENST00000616973 STAG3L2P0CL84 134 aa12.73□□□□□ -0.37
NR1H3-235ENST00000616973 STAG3L3P0CL85 134 aa12.73□□□□□ -0.37
NR1H3-235ENST00000616973 AGAP20933 346 aa12.73□□□□□ -0.37
NR1H3-235ENST00000616973 LGALS7P47929 136 aa12.73□□□□□ -0.37
NR1H3-235ENST00000616973 B2MP61769 119 aa12.73□□□□□ -0.37
NR1H3-235ENST00000616973 HABP2Q14520 560 aaPredicted RBP12.73□□□□□ -0.37
NR1H3-235ENST00000616973 CYP2G1PQ6ZSU1 146 aa12.73□□□□□ -0.37
NR1H3-235ENST00000616973 BEND2Q8NDZ0 799 aa12.73□□□□□ -0.37
NR1H3-235ENST00000616973 PAGE4O60829 102 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 OPN1MWP04001 364 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 OPN1MW2P0DN77 364 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 OPN1MW3P0DN78 364 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 DEFA4P12838 97 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 ERHP84090 104 aaKnown RBP12.72□□□□□ -0.37
NR1H3-235ENST00000616973 PRR20EP86478 221 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 PRR20CP86479 221 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 PRR20DP86480 221 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 PRR20BP86481 221 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 PRR20AP86496 221 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 HLA-DRB5Q30154 266 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 VMA21Q3ZAQ7 101 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 OR8B3Q8NGG8 313 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 GATAD1Q8WUU5 269 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 NEU4Q8WWR8 484 aaPredicted RBP12.72□□□□□ -0.37
NR1H3-235ENST00000616973 OR8B2Q96RD0 313 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 CLEC7AQ9BXN2 247 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 PATZ1Q9HBE1 687 aaKnown RBP12.72□□□□□ -0.37
NR1H3-235ENST00000616973 IGF2RP11717 2491 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 CXorf1O96002 111 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 UNQ6494/PRO21346Q6UXR6 183 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 STPG3Q8N7X2 389 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 LY6G5BQ8NDX9 201 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 OR4F5Q8NH21 305 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 CACNG8Q8WXS5 425 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 OR4F4Q96R69 305 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 SMIM7Q9BQ49 75 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 TXNDC17Q9BRA2 123 aa12.72□□□□□ -0.37
NR1H3-235ENST00000616973 KLF2Q9Y5W3 355 aaPredicted RBP12.72□□□□□ -0.37
NR1H3-235ENST00000616973 PPIAL4CA0A0B4J2A2 164 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 PPIAL4GP0DN37 164 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 GPX4P36969 197 aaPredicted RBP12.71□□□□□ -0.37
NR1H3-235ENST00000616973 RHOBP62745 196 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 CD69Q07108 199 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 LY6DQ14210 128 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 TMEM241Q24JQ0 296 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 C1QL4Q86Z23 238 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 OR10W1Q8NGF6 305 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 SSMEM1Q8WWF3 244 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 TIMD4Q96H15 378 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 SLC45A2Q9UMX9 530 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 NBEAQ8NFP9 2946 aa12.71□□□□□ -0.37
NR1H3-235ENST00000616973 hCG_1809904A0A1W2PP81 198 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 A0A1W2PR64 198 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 A0A1W2PRV1 198 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 LINC00869P0C866 280 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 IGFBP2P18065 325 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 ELOBQ15370 118 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 TEX45Q8NA69 505 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 CTDSP1Q9GZU7 261 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 SAV1Q9H4B6 383 aaPredicted RBP12.7□□□□□ -0.38
NR1H3-235ENST00000616973 ZNF430Q9H8G1 570 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms