RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MBD2Q9UBB5 411 aa13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 TNFSF18Q9UNG2 199 aa13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 LSM5Q9Y4Y9 91 aaKnown RBP13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 A0A087X0M5 115 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 TRAV14DV4A0A0A6YYC5 116 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 A0A1B0GX30 115 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 MED6O75586 246 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 IFNA7P01567 189 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 HTR1DP28221 377 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 OPCMLQ14982 345 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 LGALSLQ3ZCW2 172 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 Q5BKY6 102 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 FAM53AQ6NSI3 398 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 TMUB2Q71RG4 321 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 ZNF767PQ75MW2 155 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 FOXRED2Q8IWF2 684 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 ABHD12Q8N2K0 398 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 ZNF439Q8NDP4 499 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 LHFPL5Q8TAF8 219 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 ZNF596Q8TC21 504 aa13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 NOL4LQ96MY1 436 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC3-209ENST00000616395 HERC2O95714 4834 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 FAM90A9PA6NNJ1 464 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 SEC14L6B5MCN3 397 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 FAM90A26D6RGX4 464 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 G3V3Q6 166 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 J3QR06 171 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 TXNL1O43396 289 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 DEDDO75618 318 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 HRASP01112 189 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 BRS3P32247 399 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 NMSQ5H8A3 153 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 CLCC1Q96S66 551 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 ZMAT4Q9H898 229 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 COA4Q9NYJ1 87 aa13.75□□□□□ -0.21
TRAPPC3-209ENST00000616395 SAA2-SAA4A0A096LPE2 208 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 K7EPK0 472 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 TAAR5O14804 337 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 FCGR3BO75015 233 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 NQO2P16083 231 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 AP2S1P53680 142 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 ZNF816Q0VGE8 651 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 IL15RAQ13261 267 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 EIF4EBP1Q13541 118 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 KCNRGQ8N5I3 272 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 FAM71E2Q8N5Q1 922 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 OR4D5Q8NGN0 318 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 GPHA2Q96T91 129 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 SLC25A31Q9H0C2 315 aa13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC3-209ENST00000616395 A0A1W2PPE3 182 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 RBMXL2O75526 392 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 SCAF4O95104 1147 aaKnown RBP13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 IGLV1-47P01700 117 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 MBPP02686 304 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 MC5RP33032 325 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 CEACAM3P40198 252 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 P2RY1P47900 373 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 ZNF134P52741 427 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 DEFB136Q30KP8 78 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 OR2B11Q5JQS5 317 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 LAMTOR1Q6IAA8 161 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 SLC51BQ86UW2 128 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 DMBX1Q8NFW5 382 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 OR8H1Q8NGG4 311 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 ARPC5LQ9BPX5 153 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 DPM3Q9P2X0 92 aa13.73□□□□□ -0.21
TRAPPC3-209ENST00000616395 M0QZK8 103 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 RGS13O14921 159 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 KRASP01116 189 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 FRMD6-AS1P0C7T7 363 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 RPL30P62888 115 aaKnown RBP13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 NDUFA5Q16718 116 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 HLA-DRB5Q30154 266 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 ZNF585BQ52M93 769 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 ZNF833PQ6ZTB9 187 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 GPR146Q96CH1 333 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 AQP10Q96PS8 301 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 RAB40CQ96S21 281 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 EDA2RQ9HAV5 297 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 PLSCR3Q9NRY6 295 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 LINC00527Q9UJ94 153 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 BOLA1Q9Y3E2 137 aa13.72□□□□□ -0.21
TRAPPC3-209ENST00000616395 SLC31A2O15432 143 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 BCL2L11O43521 198 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 JTBO76095 146 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 CXCL2P19875 107 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 RPL12P30050 165 aaKnown RBP13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 RAB14P61106 215 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 TGIF2LXQ8IUE1 241 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 CIB3Q96Q77 187 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 RNF126Q9BV68 326 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 CACNG5Q9UF02 275 aa13.71□□□□□ -0.21
TRAPPC3-209ENST00000616395 MARCH11A6NNE9 402 aa13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 LINC00473A8K010 186 aa13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 BUB1B-PAK6H3BSN5 160 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms