RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 GNB1LQ9BYB4 327 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 PLXNB2O15031 1838 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 C1orf210Q8IVY1 113 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 SSBP4Q9BWG4 385 aaPredicted RBP15.91■□□□□ 0.14
SPAST-203ENST00000615843 TAF1LQ8IZX4 1826 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 PCOLCEQ15113 449 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 TRIP6Q15654 476 aaKnown RBP15.91■□□□□ 0.14
SPAST-203ENST00000615843 PRSS8Q16651 343 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 SYT8Q8NBV8 401 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 GPR82Q96P67 336 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 OSTCQ9NRP0 149 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 COL4A5P29400 1685 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 J3QW42 95 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 TEX38Q6PEX7 206 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 LHFPL1Q86WI0 220 aa15.91■□□□□ 0.14
SPAST-203ENST00000615843 NPIPB6E9PJ23 425 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 COX6A1P12074 109 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 FAM169BQ8N8A8 192 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 TMEM186Q96B77 213 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 FOXC2Q99958 501 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 CD55P08174 381 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 SPEM2Q0P670 501 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 FMC1Q96HJ9 113 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 UBR3Q6ZT12 1888 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 MEF2CQ06413 473 aaPredicted RBP15.9■□□□□ 0.14
SPAST-203ENST00000615843 SLC25A45Q8N413 288 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 PATE3B3GLJ2 98 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 ATP5LO75964 103 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 TYMSP04818 313 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 CCL1P22362 96 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 ZNF257Q9Y2Q1 563 aa15.9■□□□□ 0.14
SPAST-203ENST00000615843 IGKV3D-11A0A0A0MRZ8 115 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 A0A1B0GW15 77 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 IFNL4K9M1U5 179 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 LINC00470Q9BZP3 86 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 CHRNA10Q9GZZ6 450 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 NDUFA2O43678 99 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 CDX4O14627 284 aaPredicted RBP15.89■□□□□ 0.13
SPAST-203ENST00000615843 TSPAN13O95857 204 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 PTPRZ1P23471 2315 aaPredicted RBP15.89■□□□□ 0.13
SPAST-203ENST00000615843 GATA2P23769 480 aaPredicted RBP15.89■□□□□ 0.13
SPAST-203ENST00000615843 OR9G1Q8NH87 305 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 C1QTNF5Q9BXJ0 243 aa15.89■□□□□ 0.13
SPAST-203ENST00000615843 TRAV1-1A0A0B4J248 108 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 DEFB123Q8N688 67 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 ZNRF1Q8ND25 227 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 OR52E5Q8NH55 327 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 PRR33A8MZF0 331 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 ACP7Q6ZNF0 438 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 ZNF441Q8N8Z8 693 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 OR13A1Q8NGR1 328 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 LYZL4Q96KX0 146 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 ZNF71Q9NQZ8 489 aaPredicted RBP15.88■□□□□ 0.13
SPAST-203ENST00000615843 WNK3Q9BYP7 1800 aa15.88■□□□□ 0.13
SPAST-203ENST00000615843 REPIN1Q9BWE0 567 aaKnown RBP15.87■□□□□ 0.13
SPAST-203ENST00000615843 FOXI3A8MTJ6 420 aaPredicted RBP15.87■□□□□ 0.13
SPAST-203ENST00000615843 SS18L1O75177 396 aaPredicted RBP15.87■□□□□ 0.13
SPAST-203ENST00000615843 SMAGPQ0VAQ4 97 aa15.87■□□□□ 0.13
SPAST-203ENST00000615843 ORMDL3Q8N138 153 aa15.87■□□□□ 0.13
SPAST-203ENST00000615843 OR4X2Q8NGF9 303 aa15.87■□□□□ 0.13
SPAST-203ENST00000615843 GTF3AQ92664 365 aaKnown RBP15.87■□□□□ 0.13
SPAST-203ENST00000615843 KIR2DL4Q99706 377 aa15.87■□□□□ 0.13
SPAST-203ENST00000615843 Q6AWC8 147 aa15.87■□□□□ 0.13
SPAST-203ENST00000615843 SMRP1Q8NCR6 262 aa15.87■□□□□ 0.13
SPAST-203ENST00000615843 OR5A1Q8NGJ0 315 aa15.87■□□□□ 0.13
SPAST-203ENST00000615843 RBBP6Q7Z6E9 1792 aaKnown RBP15.87■□□□□ 0.13
SPAST-203ENST00000615843 C19orf54Q5BKX5 351 aa15.87■□□□□ 0.13
SPAST-203ENST00000615843 OSR1Q8TAX0 266 aaPredicted RBP15.87■□□□□ 0.13
SPAST-203ENST00000615843 CHCHD2Q9Y6H1 151 aaPredicted RBP15.87■□□□□ 0.13
SPAST-203ENST00000615843 ZNF837Q96EG3 531 aaPredicted RBP15.86■□□□□ 0.13
SPAST-203ENST00000615843 MUC21A0A0G2JKD1 596 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 MUC21A0A140T8X8 626 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 SRSF4Q08170 494 aaKnown RBP15.86■□□□□ 0.13
SPAST-203ENST00000615843 CIRBPQ14011 172 aaKnown RBP15.86■□□□□ 0.13
SPAST-203ENST00000615843 MUC21Q5SSG8 566 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 CHODLQ9H9P2 273 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 ZNF319Q9P2F9 582 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 TRAV24A0A0B4J272 114 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 C10orf126Q8N4M7 172 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 SCN8AQ9UQD0 1980 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 TMEM170BQ5T4T1 132 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 UNQ5815/PRO19632Q6UWF5 114 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 WDR82Q6UXN9 313 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 ZNF664Q8N3J9 261 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 OR2K2Q8NGT1 345 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 ORAOV1Q8WV07 137 aa15.86■□□□□ 0.13
SPAST-203ENST00000615843 A0A1W2PS18 150 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 STAG3L3P0CL85 134 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 TMEM144Q7Z5S9 345 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 TEX45Q8NA69 505 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 PLPPR1Q8TBJ4 325 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 SIGMAR1Q99720 223 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 NHP2Q9NX24 153 aaKnown RBP15.85■□□□□ 0.13
SPAST-203ENST00000615843 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.85■□□□□ 0.13
SPAST-203ENST00000615843 ST20Q9HBF5 79 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 KLRB1Q12918 225 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 FOXL1Q12952 345 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 C1orf185Q5T7R7 199 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 EBLN2Q6P2I7 272 aa15.85■□□□□ 0.13
SPAST-203ENST00000615843 CACNG8Q8WXS5 425 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 289.6 ms