RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 OOEPA6NGQ2 149 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 WNT2P09544 360 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 HINT1P49773 126 aaPredicted RBP13.65□□□□□ -0.22
CNOT3-208ENST00000613073 SELENOTP62341 195 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 SLC38A11Q08AI6 406 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 SPATA45Q537H7 98 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 FAM201AQ5SY85 155 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 MRPL52Q86TS9 123 aaKnown RBP13.65□□□□□ -0.22
CNOT3-208ENST00000613073 LINC01551Q86U37 167 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 LYG1Q8N1E2 194 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 OR10G9Q8NGN4 311 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 OR10G7Q8NGN6 311 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 FBXL7Q9UJT9 491 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 IGHV3-13P01766 116 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 CRISP2P16562 243 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 COMPP49747 757 aaPredicted RBP13.65□□□□□ -0.22
CNOT3-208ENST00000613073 RANP62826 216 aaKnown RBP13.65□□□□□ -0.22
CNOT3-208ENST00000613073 TBR1Q16650 682 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 GFRALQ6UXV0 394 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 C1orf174Q8IYL3 243 aa13.65□□□□□ -0.22
CNOT3-208ENST00000613073 CBY3A6NI87 242 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 NDUFB4O95168 129 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 ZNF585BQ52M93 769 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 ATOH7Q8N100 152 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 GCSAMQ8N6F7 178 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 PRR7Q8TB68 274 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 GAL3ST2Q9H3Q3 398 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 ELOVL5Q9NYP7 299 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 IGKV1D-17A0A075B6S4 117 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 NKX6-3A6NJ46 265 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 RBFOX2O43251 390 aaKnown RBP eCLIP13.64□□□□□ -0.239e-17■■■■□ 22.8
CNOT3-208ENST00000613073 CLDN1O95832 211 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 ATP5G3P48201 142 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 MAJINQ3KP22 176 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 ITLN1Q8WWA0 313 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 NINJ1Q92982 152 aa13.64□□□□□ -0.23
CNOT3-208ENST00000613073 HNRNPA3P51991 378 aaKnown RBP13.63□□□□□ -0.23
CNOT3-208ENST00000613073 MZT1Q08AG7 82 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 TMEM144Q7Z5S9 345 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 ZNRF1Q8ND25 227 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 SVIPQ8NHG7 77 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 ALKBH7Q9BT30 221 aaPredicted RBP13.63□□□□□ -0.23
CNOT3-208ENST00000613073 SRRM5B3KS81 715 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 DIRC3C9JPN6 131 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 M0QZ24 198 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 IGKV1-5P01602 117 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 FAM87AP0C7U9 286 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 LINC00205P59089 165 aa13.63□□□□□ -0.23
CNOT3-208ENST00000613073 CTXND1A0A1B0GTU2 59 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 RAMP3O60896 148 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 CD40P25942 277 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 GNB1P62873 340 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 SUMO1P63165 101 aaKnown RBP13.62□□□□□ -0.23
CNOT3-208ENST00000613073 SNRNP40Q96DI7 357 aaKnown RBP13.62□□□□□ -0.23
CNOT3-208ENST00000613073 C5orf30Q96GV9 206 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 WNT10AQ9GZT5 417 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 LIN7CQ9NUP9 197 aaKnown RBP13.62□□□□□ -0.23
CNOT3-208ENST00000613073 LAMTOR2Q9Y2Q5 125 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 SPINK4O60575 86 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 IGHV3-7P01780 117 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 WFDC8Q8IUA0 241 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 PKDREJQ9NTG1 2253 aa13.62□□□□□ -0.23
CNOT3-208ENST00000613073 PMCHP20382 165 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 RPL30P62888 115 aaKnown RBP13.61□□□□□ -0.23
CNOT3-208ENST00000613073 PAFAH1B2P68402 229 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 TFF3Q07654 80 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 ZNF645Q8N7E2 425 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 MRPL18Q9H0U6 180 aaKnown RBP13.61□□□□□ -0.23
CNOT3-208ENST00000613073 SLC17A3O00476 420 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 ITGB1BP1O14713 200 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 ZNF816Q0VGE8 651 aaPredicted RBP13.61□□□□□ -0.23
CNOT3-208ENST00000613073 SIGLECL1Q8N7X8 197 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 NBASA2RRP1 2371 aa13.61□□□□□ -0.23
CNOT3-208ENST00000613073 LOC105371242A0A075B767 164 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 MDFIC2A0A1B0GVS7 189 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 K7ENP7 123 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 TMEM11P17152 192 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 EDDM3BP56851 147 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 ZNF90Q03938 601 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 GCSAMLQ5JQS6 135 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 IGLV3-9A0A075B6K5 115 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 LOC102724200A0A096LPH7 203 aaPredicted RBP13.6□□□□□ -0.23
CNOT3-208ENST00000613073 HYPMO75409 117 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 CDKN1BP46527 198 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 FGFRL1Q8N441 504 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 SFRP2Q96HF1 295 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 PSG11Q9UQ72 335 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 DSCAMO60469 2012 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 C16orf97H3BN30 126 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 VENTXO95231 258 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 KRASP01116 189 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 IER3P46695 156 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 SELENOVP59797 346 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 KIAA1644Q3SXP7 199 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 DEFB108BQ8NET1 73 aa13.6□□□□□ -0.23
CNOT3-208ENST00000613073 SPINK9Q5DT21 86 aa13.59□□□□□ -0.23
CNOT3-208ENST00000613073 OR4B1Q8NGF8 309 aa13.59□□□□□ -0.23
CNOT3-208ENST00000613073 TBL2Q9Y4P3 447 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms