RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ZC4H2Q9NQZ6 224 aa13.96□□□□□ -0.18
SREK1-216ENST00000612404 NDUFA4L2Q9NRX3 87 aa13.96□□□□□ -0.18
SREK1-216ENST00000612404 MOB4Q9Y3A3 225 aa13.96□□□□□ -0.18
SREK1-216ENST00000612404 BTBD17A6NE02 478 aa13.95□□□□□ -0.18
SREK1-216ENST00000612404 GPR137BO60478 399 aa13.95□□□□□ -0.18
SREK1-216ENST00000612404 FOSL1P15407 271 aa13.95□□□□□ -0.18
SREK1-216ENST00000612404 RPL27AP46776 148 aaKnown RBP13.95□□□□□ -0.18
SREK1-216ENST00000612404 P2RY1P47900 373 aa13.95□□□□□ -0.18
SREK1-216ENST00000612404 Q6YL49 198 aa13.95□□□□□ -0.18
SREK1-216ENST00000612404 OR10W1Q8NGF6 305 aa13.95□□□□□ -0.18
SREK1-216ENST00000612404 HIPK2Q9H2X6 1198 aa13.95□□□□□ -0.18
SREK1-216ENST00000612404 WSB1Q9Y6I7 421 aa13.95□□□□□ -0.18
SREK1-216ENST00000612404 MSGN1A6NI15 193 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 CYSRT1A8MQ03 144 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 RPL12P30050 165 aaKnown RBP13.94□□□□□ -0.18
SREK1-216ENST00000612404 SPANXN5Q5MJ07 72 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 Q71RC1 249 aaPredicted RBP13.94□□□□□ -0.18
SREK1-216ENST00000612404 OR2C3Q8N628 320 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 SIGLECL1Q8N7X8 197 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 SMIM8Q96KF7 97 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 LYRM2Q9NU23 88 aaPredicted RBP13.94□□□□□ -0.18
SREK1-216ENST00000612404 TMEM160Q9NX00 188 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 PAIP2BQ9ULR5 123 aaKnown RBP13.94□□□□□ -0.18
SREK1-216ENST00000612404 HSPB11Q9Y547 144 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 FAM24AA6NFZ4 105 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 CXCL2P19875 107 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 ACOT7LQ6ZUV0 252 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 C9orf62Q8N4C0 152 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 C5orf56Q8N8D9 126 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 OR5R1Q8NH85 324 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 SSMEM1Q8WWF3 244 aa13.94□□□□□ -0.18
SREK1-216ENST00000612404 HOXA3O43365 443 aaPredicted RBP13.93□□□□□ -0.18
SREK1-216ENST00000612404 APELAP0DMC3 54 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 VDAC2P45880 294 aaPredicted RBP13.93□□□□□ -0.18
SREK1-216ENST00000612404 TAS2R30P59541 319 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 SSBP2P81877 361 aaPredicted RBP13.93□□□□□ -0.18
SREK1-216ENST00000612404 FXYD3Q14802 87 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 LGALSLQ3ZCW2 172 aaPredicted RBP13.93□□□□□ -0.18
SREK1-216ENST00000612404 SRSF12Q8WXF0 261 aaKnown RBP13.93□□□□□ -0.18
SREK1-216ENST00000612404 A0A1B0GW64 132 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 RNF222A6NCQ9 220 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 SH2D7A6NKC9 451 aaPredicted RBP13.93□□□□□ -0.18
SREK1-216ENST00000612404 CGB1A6NKQ9 187 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 HKR1P10072 659 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 CX3CL1P78423 397 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 LAMTOR1Q6IAA8 161 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 ABHD5Q8WTS1 349 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 PRDM13Q9H4Q3 707 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
SREK1-216ENST00000612404 A0A1W2PN81 502 aa13.92□□□□□ -0.18
SREK1-216ENST00000612404 FGF16O43320 207 aa13.92□□□□□ -0.18
SREK1-216ENST00000612404 TSC22D2O75157 780 aa13.92□□□□□ -0.18
SREK1-216ENST00000612404 IFNA10P01566 189 aa13.92□□□□□ -0.18
SREK1-216ENST00000612404 HLA-DRB1P01911 266 aa13.92□□□□□ -0.18
SREK1-216ENST00000612404 CHRNA7P36544 502 aa13.92□□□□□ -0.18
SREK1-216ENST00000612404 TMEM267Q0VDI3 215 aaPredicted RBP13.92□□□□□ -0.18
SREK1-216ENST00000612404 ZNF562Q6V9R5 426 aa13.92□□□□□ -0.18
SREK1-216ENST00000612404 AQP10Q96PS8 301 aa13.92□□□□□ -0.18
SREK1-216ENST00000612404 GSX1Q9H4S2 264 aaPredicted RBP13.92□□□□□ -0.18
SREK1-216ENST00000612404 STRAPQ9Y3F4 350 aaKnown RBP13.92□□□□□ -0.18
SREK1-216ENST00000612404 NSD1Q96L73 2696 aaPredicted RBP13.92□□□□□ -0.18
SREK1-216ENST00000612404 IGSF23A1L1A6 192 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 OR2F1Q13607 317 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 RBMS3Q6XE24 437 aaKnown RBP13.91□□□□□ -0.18
SREK1-216ENST00000612404 FAM103A1Q9BTL3 118 aaKnown RBP13.91□□□□□ -0.18
SREK1-216ENST00000612404 SLC25A31Q9H0C2 315 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 VPREB3Q9UKI3 123 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 LY86O95711 162 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 SCGB2A2Q13296 93 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 TMEM252Q8N6L7 170 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 OR4C12Q96R67 309 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 HSPB9Q9BQS6 159 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 ARL6Q9H0F7 186 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 CDC42EP3Q9UKI2 254 aa13.91□□□□□ -0.18
SREK1-216ENST00000612404 IGHV7-81A0A0B4J1V7 117 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 M0QZK8 103 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 CST7O76096 145 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 AMY1AP04745 511 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 METTL15P1P0C7V9 234 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 OR13C7P0DN81 318 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 SRD5A1P18405 259 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 SNCAP37840 140 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
SREK1-216ENST00000612404 ERHP84090 104 aaKnown RBP13.9□□□□□ -0.18
SREK1-216ENST00000612404 EWSR1Q01844 656 aaKnown RBP eCLIP13.9□□□□□ -0.18
SREK1-216ENST00000612404 NHLH2Q02577 135 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 WT1-ASQ06250 92 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 ZNF345Q14585 488 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 TMUB2Q71RG4 321 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 STX12Q86Y82 276 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 U3KQ87 197 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 F8P00451 2351 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 A0A0D9SG52 128 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 REG1AP05451 166 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 NDPQ00604 133 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 MRPL41Q8IXM3 137 aaKnown RBP13.9□□□□□ -0.18
SREK1-216ENST00000612404 TMEM217Q8N7C4 229 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms