RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ADH4P08319 380 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 IQCJQ1A5X6 159 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 MRPL54Q6P161 138 aaKnown RBP11.58□□□□□ -0.56
COL6A1-207ENST00000612273 FAM216BQ8N7L0 139 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 SLC24A4Q8NFF2 622 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 OR10W1Q8NGF6 305 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 HSPB9Q9BQS6 159 aa11.58□□□□□ -0.56
COL6A1-207ENST00000612273 DSCAMO60469 2012 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 TCAPO15273 167 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 SERF1AO75920 110 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 VENTXO95231 258 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 MRPS11P82912 194 aaKnown RBP11.57□□□□□ -0.56
COL6A1-207ENST00000612273 TEPPQ6URK8 271 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 PQLC2Q6ZP29 291 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 ZGRF1Q86YA3 2104 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 NDUFAF3Q9BU61 184 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 NPVFQ9HCQ7 196 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 CXorf1O96002 111 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 PLAUP00749 431 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 WNT2P09544 360 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 STAG3L2P0CL84 134 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 STAG3L3P0CL85 134 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 CDKN1AP38936 164 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 SUMO1P63165 101 aaKnown RBP11.57□□□□□ -0.56
COL6A1-207ENST00000612273 OR1L6Q8NGR2 347 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 PLEKHA3Q9HB20 300 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 TNRC6BQ9UPQ9 1833 aaKnown RBP11.57□□□□□ -0.56
COL6A1-207ENST00000612273 AKAP6Q13023 2319 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 TANC2Q9HCD6 1990 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 CRISP2P16562 243 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 VDAC2P45880 294 aaPredicted RBP11.57□□□□□ -0.56
COL6A1-207ENST00000612273 TAS2R60P59551 318 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 KRTDAPP60985 99 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 RPL15P61313 204 aaKnown RBP11.57□□□□□ -0.56
COL6A1-207ENST00000612273 CCL8P80075 99 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 HTD2P86397 168 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 DBX2Q6ZNG2 339 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 C1orf159Q96HA4 380 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 LINC00479Q96M42 142 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 IER2Q9BTL4 223 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 SSBP3Q9BWW4 388 aaPredicted RBP11.57□□□□□ -0.56
COL6A1-207ENST00000612273 MRPL18Q9H0U6 180 aaKnown RBP11.57□□□□□ -0.56
COL6A1-207ENST00000612273 NAGKQ9UJ70 344 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 PROCRQ9UNN8 238 aa11.57□□□□□ -0.56
COL6A1-207ENST00000612273 POLR3KQ9Y2Y1 108 aaPredicted RBP11.57□□□□□ -0.56
COL6A1-207ENST00000612273 TMEM265A0A087WTH1 108 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 A6NNC1 897 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 GCGP01275 180 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 RPP30P78346 268 aaKnown RBP11.56□□□□□ -0.56
COL6A1-207ENST00000612273 DEFB124Q8NES8 71 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 SNHG12Q9BXW3 62 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 WNK2Q9Y3S1 2297 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 MGST3O14880 152 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 LOXL3P58215 753 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 TRIP6Q15654 476 aaKnown RBP11.56□□□□□ -0.56
COL6A1-207ENST00000612273 OR9G1Q8NH87 305 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 NAT8BQ9UHF3 227 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 KMT2EQ8IZD2 1858 aa11.56□□□□□ -0.56
COL6A1-207ENST00000612273 PMCHP20382 165 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 OPRK1P41145 380 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 VWC2Q2TAL6 325 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 BHLHA15Q7RTS1 189 aaPredicted RBP11.55□□□□□ -0.56
COL6A1-207ENST00000612273 RNASEH2CQ8TDP1 164 aaKnown RBP11.55□□□□□ -0.56
COL6A1-207ENST00000612273 UHRF2Q96PU4 802 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 TRAV5A0A0B4J249 113 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 J3QR06 171 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 OR10J1P30954 320 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 PRR27Q6MZM9 219 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 RPH3ALQ9UNE2 315 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 CENPWQ5EE01 88 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 C22orf34Q6ZV56 151 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 OR4S2Q8NH73 311 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 PPP1R35Q8TAP8 253 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 PARD6AQ9NPB6 346 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 OR51B2Q9Y5P1 312 aa11.55□□□□□ -0.56
COL6A1-207ENST00000612273 SPTAN1Q13813 2472 aaKnown RBP11.55□□□□□ -0.56
COL6A1-207ENST00000612273 SPTBN1Q01082 2364 aaKnown RBP11.55□□□□□ -0.56
COL6A1-207ENST00000612273 SRRM5B3KS81 715 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 TMPRSS2O15393 492 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 RHOBP62745 196 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 MMD2Q8IY49 270 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 STARD4Q96DR4 205 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 IGHV3-21A0A0B4J1V1 117 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 SRRM4A7MD48 611 aaKnown RBP11.54□□□□□ -0.56
COL6A1-207ENST00000612273 NTF3P20783 257 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 LCN2P80188 198 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 RAB31Q13636 194 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 COA6Q5JTJ3 125 aaKnown RBP11.54□□□□□ -0.56
COL6A1-207ENST00000612273 Q6ZWC4 215 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 GNG4P50150 75 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 C10orf55Q5SWW7 151 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 TMEM144Q7Z5S9 345 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 ST6GALNAC3Q8NDV1 305 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 SARAFQ96BY9 339 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 NABP2Q9BQ15 211 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 JPT1Q9UK76 154 aa11.54□□□□□ -0.56
COL6A1-207ENST00000612273 TLN1Q9Y490 2541 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms