RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 CBLN4Q9NTU7 201 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 GAGE10A6NGK3 116 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 NTN3O00634 580 aaPredicted RBP13.18□□□□□ -0.3
TNXB-208ENST00000611016 DNLZQ5SXM8 178 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 ZNF362Q5T0B9 420 aaPredicted RBP13.18□□□□□ -0.3
TNXB-208ENST00000611016 RNASEH2CQ8TDP1 164 aaKnown RBP13.18□□□□□ -0.3
TNXB-208ENST00000611016 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
TNXB-208ENST00000611016 OR4X2Q8NGF9 303 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 DPH3Q96FX2 82 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 SPRR3Q9UBC9 169 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 PINLYPA6NC86 204 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 PRB3Q04118 309 aaPredicted RBP13.18□□□□□ -0.3
TNXB-208ENST00000611016 PRSS8Q16651 343 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 LINC00305Q7Z4B0 112 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 FLVCR1-AS1Q8TAF5 88 aa13.18□□□□□ -0.3
TNXB-208ENST00000611016 ZDBF2Q9HCK1 2354 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 PROB1E7EW31 1015 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 FAM159AQ6UWV7 190 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 ZNF418Q8TF45 676 aaPredicted RBP13.17□□□□□ -0.3
TNXB-208ENST00000611016 PARLQ9H300 379 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 LINC00114Q6XXX2 140 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.17□□□□□ -0.3
TNXB-208ENST00000611016 FOXI3A8MTJ6 420 aaPredicted RBP13.17□□□□□ -0.3
TNXB-208ENST00000611016 GOLT1AQ6ZVE7 132 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 UCP1P25874 307 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 CDX1P47902 265 aaPredicted RBP13.17□□□□□ -0.3
TNXB-208ENST00000611016 H2BFSP57053 126 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 OR4A47Q6IF82 309 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 FMC1Q96HJ9 113 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 HIST1H4GQ99525 98 aa13.17□□□□□ -0.3
TNXB-208ENST00000611016 ANKRD36A6QL64 1941 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 IL6RP08887 468 aaPredicted RBP13.16□□□□□ -0.3
TNXB-208ENST00000611016 ZNF56Q15929 161 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 TBR1Q16650 682 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 LAIR2Q6ISS4 152 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 FOXA2Q9Y261 457 aaPredicted RBP13.16□□□□□ -0.3
TNXB-208ENST00000611016 IGKV3OR2-268A0A0C4DH90 116 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 ZCCHC24Q8N2G6 241 aaKnown RBP13.16□□□□□ -0.3
TNXB-208ENST00000611016 MESP1Q9BRJ9 268 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 TBX6O95947 436 aaPredicted RBP13.16□□□□□ -0.3
TNXB-208ENST00000611016 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 MRPL20Q9BYC9 149 aaKnown RBP13.16□□□□□ -0.3
TNXB-208ENST00000611016 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 NPFFO15130 113 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 CFHR1Q03591 330 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 GPR61Q9BZJ8 451 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 E9PLN8 166 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 SRIP30626 198 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 ZIC4Q8N9L1 334 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 VKORC1Q9BQB6 163 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 NPCDR1Q9BY65 106 aa13.16□□□□□ -0.3
TNXB-208ENST00000611016 PAX1P15863 534 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 ITLN2Q8WWU7 325 aaPredicted RBP13.15□□□□□ -0.3
TNXB-208ENST00000611016 NEU1Q99519 415 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 RARRES2Q99969 163 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 LINC00312Q9Y6C7 94 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 C17orf98A8MV24 154 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 LYNX1G3V0Z9 82 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 LYNX1P0DP58 116 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 A0A0G2JK05 382 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 RRHO14718 337 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 CCL3L1P16619 93 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 GPR183P32249 361 aa13.15□□□□□ -0.3
TNXB-208ENST00000611016 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
TNXB-208ENST00000611016 GEMIN7Q9H840 131 aaKnown RBP13.15□□□□□ -0.3
TNXB-208ENST00000611016 TGIF2-C20orf24A0A0A6YYL0 155 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 CLEC19AQ6UXS0 136 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 COLCA1Q6ZS62 124 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 ZNF236Q9UL36 1845 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 CD69Q07108 199 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 TMEM136Q6ZRR5 245 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 THBDP07204 575 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 ASIPP42127 132 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 OR11H4Q8NGC9 324 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 FAM131CQ96AQ9 280 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 CACNA1IQ9P0X4 2223 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 NPIPB7O75200 414 aa13.14□□□□□ -0.31
TNXB-208ENST00000611016 CARHSP1Q9Y2V2 147 aaKnown RBP13.14□□□□□ -0.31
TNXB-208ENST00000611016 CENPWQ5EE01 88 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 TMEM101Q96IK0 257 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 IGLV3-32A0A0A0MS00 114 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 C9JCJ5 164 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 ATP5LO75964 103 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 IGHV3OR16-8A0A075B7F1 116 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 ICAM4Q14773 271 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 MBNL2Q5VZF2 373 aaKnown RBP13.13□□□□□ -0.31
TNXB-208ENST00000611016 C21orf62Q9NYP8 219 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 TMEM262E9PQX1 116 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 TCF23Q7RTU1 214 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 CIARTQ8N365 385 aaPredicted RBP13.13□□□□□ -0.31
TNXB-208ENST00000611016 PQLC2LA1A4F0 135 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 MTURNQ8N3F0 131 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 LRTM2Q8N967 370 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 OR4D5Q8NGN0 318 aa13.13□□□□□ -0.31
TNXB-208ENST00000611016 WBP1Q96G27 269 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms