RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PRR20CP86479 221 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 PRR20DP86480 221 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 PRR20BP86481 221 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 PRR20AP86496 221 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 EFNB3Q15768 340 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 GCSAMLQ5JQS6 135 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 NCMAPQ5T1S8 102 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 PDPNQ86YL7 162 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 PNKDQ8N490 385 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 VSTM2AQ8TAG5 236 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 SLC35E1Q96K37 410 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 IMMP2LQ96T52 175 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 PCGF1Q9BSM1 259 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 PATZ1Q9HBE1 687 aaKnown RBP8.52□□□□□ -1.04
PABPC1-224ENST00000610907 DCAF16Q9NXF7 216 aa8.52□□□□□ -1.04
PABPC1-224ENST00000610907 TET2Q6N021 2002 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-224ENST00000610907 A0A087X0M5 115 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 A0A1B0GX30 115 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 SRRM4A7MD48 611 aaKnown RBP8.52□□□□□ -1.05
PABPC1-224ENST00000610907 H0YJW9 148 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 FSTL3O95633 263 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 IGKV1-16P04430 117 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 ARL14EPLP0DKL9 152 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 USF1P22415 310 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-224ENST00000610907 NPPCP23582 126 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 APOBEC3AP31941 199 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-224ENST00000610907 GALR1P47211 349 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 ZNF137PP52743 207 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 GNB1P62873 340 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 SSX2Q16385 188 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 CST9LP1Q5W188 147 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 KCNIP4Q6PIL6 250 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 STPG3Q8N7X2 389 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 OR4C13Q8NGP0 309 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 ABHD5Q8WTS1 349 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 CACNG8Q8WXS5 425 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 FLYWCH2Q96CP2 140 aaKnown RBP8.52□□□□□ -1.05
PABPC1-224ENST00000610907 WFIKKN1Q96NZ8 548 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 GAR1Q9NY12 217 aaKnown RBP8.52□□□□□ -1.05
PABPC1-224ENST00000610907 SLC45A2Q9UMX9 530 aa8.52□□□□□ -1.05
PABPC1-224ENST00000610907 PIEZO1Q92508 2521 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 A0A1W2PN81 502 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 SHISA9B4DS77 424 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 B9A039 149 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 PPP5D1E7EU14 171 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 PHOX2AO14813 284 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 GGCTO75223 188 aaKnown RBP8.51□□□□□ -1.05
PABPC1-224ENST00000610907 TYMSP04818 313 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 TRGC1P0CF51 173 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 SAA1P0DJI8 122 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-224ENST00000610907 AREGP15514 252 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 S100A2P29034 98 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 MC5RP33032 325 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 CHRNA7P36544 502 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 GPX4P36969 197 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-224ENST00000610907 FAM3BP58499 235 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-224ENST00000610907 LCN2P80188 198 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 ERHP84090 104 aaKnown RBP8.51□□□□□ -1.05
PABPC1-224ENST00000610907 FOXC1Q12948 553 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 LINC01551Q86U37 167 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 TMEM167AQ8TBQ9 72 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 CCL17Q92583 94 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 HINT2Q9BX68 163 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 COMMD5Q9GZQ3 224 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 DYNLRB1Q9NP97 96 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 NDUFA4L2Q9NRX3 87 aa8.51□□□□□ -1.05
PABPC1-224ENST00000610907 TRBV23-1A0A0A0MS06 115 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 E7EQL1 145 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 NDUFB4O95168 129 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 LINC00869P0C866 280 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 GCHFRP30047 84 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 RPL8P62917 257 aaKnown RBP8.5□□□□□ -1.05
PABPC1-224ENST00000610907 ZCCHC24Q8N2G6 241 aaKnown RBP8.5□□□□□ -1.05
PABPC1-224ENST00000610907 OR10X1Q8NGY0 326 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 OR2T10Q8NGZ9 312 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 OR9G1Q8NH87 305 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 SSMEM1Q8WWF3 244 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 FRZBQ92765 325 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 TNFRSF14Q92956 283 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 ST6GALNAC6Q969X2 333 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 HARBI1Q96MB7 349 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 UHRF2Q96PU4 802 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 MRPL20Q9BYC9 149 aaKnown RBP8.5□□□□□ -1.05
PABPC1-224ENST00000610907 TMEM167BQ9NRX6 74 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 SH3BGRL2Q9UJC5 107 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 PITPNC1Q9UKF7 332 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 LY96Q9Y6Y9 160 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 ICE1Q9Y2F5 2266 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 ZFHX4Q86UP3 3567 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 ZGRF1Q86YA3 2104 aa8.5□□□□□ -1.05
PABPC1-224ENST00000610907 DVL1O14640 695 aa8.49□□□□□ -1.05
PABPC1-224ENST00000610907 CD3EP07766 207 aa8.49□□□□□ -1.05
PABPC1-224ENST00000610907 RNASE2P10153 161 aaKnown RBP8.49□□□□□ -1.05
PABPC1-224ENST00000610907 DEFA4P12838 97 aa8.49□□□□□ -1.05
PABPC1-224ENST00000610907 CCL3L1P16619 93 aa8.49□□□□□ -1.05
PABPC1-224ENST00000610907 IGFBP2P18065 325 aa8.49□□□□□ -1.05
PABPC1-224ENST00000610907 IL3RAP26951 378 aa8.49□□□□□ -1.05
PABPC1-224ENST00000610907 ATP5G3P48201 142 aa8.49□□□□□ -1.05
PABPC1-224ENST00000610907 SUB1P53999 127 aaKnown RBP eCLIP8.49□□□□□ -1.051e-11■□□□□ 9.5
PABPC1-224ENST00000610907 CASP6P55212 293 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms