RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 COMMD5Q9GZQ3 224 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 CCDC59Q9P031 241 aaKnown RBP10.37□□□□□ -0.75
CTSA-218ENST00000607814 DMRT1Q9Y5R6 373 aa10.37□□□□□ -0.75
CTSA-218ENST00000607814 ALMS1Q8TCU4 4167 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 IGHV3-21A0A0B4J1V1 117 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 IGLC7A0M8Q6 106 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 FAM223BA6NKX1 122 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 NPIPB5A8MRT5 1133 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 A8MZ25 164 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 OR2C1O95371 312 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 RAB3DO95716 219 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 CRYGCP07315 174 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 DEFA4P12838 97 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 GP9P14770 177 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 CTRB1P17538 263 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 ZP3P21754 424 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 ERVK-16P61578 105 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 RPEL1Q2QD12 228 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 SP6Q3SY56 376 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 CTRB2Q6GPI1 263 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 LPCAT3Q6P1A2 487 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 SLC25A42Q86VD7 318 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 LHFPL1Q86WI0 220 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 FAM223AQ8IWN6 122 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 SLC38A6Q8IZM9 456 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 NECAP1Q8NC96 275 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 BORCS5Q969J3 196 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 MRGPRFQ96AM1 343 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 AIFM2Q9BRQ8 373 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 COMMD9Q9P000 198 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 ZNF257Q9Y2Q1 563 aa10.36□□□□□ -0.75
CTSA-218ENST00000607814 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
CTSA-218ENST00000607814 MFSD2BA6NFX1 497 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 A6NHS1 94 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 GABARAPH6UMI1 98 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 OR13C7P0DN81 318 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 TNFSF8P32971 234 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 UCP3P55916 312 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 PIGPP57054 158 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 TAS2R19P59542 299 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 WT1-ASQ06250 92 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 STEAP1BQ6NZ63 245 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 CLEC19AQ6UXS0 136 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 TMEM229BQ8NBD8 167 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 OR9G4Q8NGQ1 327 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 OR6Q1Q8NGQ2 317 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 MCFD2Q8NI22 146 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 IL17DQ8TAD2 202 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 MARCH1Q8TCQ1 289 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 QTRT1Q9BXR0 403 aaKnown RBP10.35□□□□□ -0.75
CTSA-218ENST00000607814 OR51B2Q9Y5P1 312 aa10.35□□□□□ -0.75
CTSA-218ENST00000607814 IGHV3-35A0A0C4DH35 117 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 CD74P04233 296 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 CSN3P07498 182 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 TRAPPC2P0DI81 140 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 TRAPPC2BP0DI82 140 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 SPINK9Q5DT21 86 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 OR13C8Q8NGS7 320 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 CCDC140Q96MF4 163 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 TP53RKQ96S44 253 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 BCL7BQ9BQE9 202 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 ELOVL1Q9BW60 279 aa10.34□□□□□ -0.75
CTSA-218ENST00000607814 IGLV11-55A0A075B6I3 123 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 IZUMO1RA6ND01 250 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 FABP12A6NFH5 140 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 ZNF701M0R085 212 aaPredicted RBP10.33□□□□□ -0.76
CTSA-218ENST00000607814 SNAPC5O75971 98 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 S100GP29377 79 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 MFAP2P55001 183 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 SLC25A24Q6NUK1 477 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 ARRDC1Q8N5I2 433 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 OR4C16Q8NGL9 310 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 OR1L8Q8NGR8 309 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 TERB2Q8NHR7 220 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 C15orf40Q8WUR7 153 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 SMIM4Q8WVI0 70 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 SEC22AQ96IW7 307 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 SPATA25Q9BR10 227 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 NDUFA4L2Q9NRX3 87 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 PCLOQ9Y6V0 5065 aa10.33□□□□□ -0.76
CTSA-218ENST00000607814 HERC2O95714 4834 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 TPPPO94811 219 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 CLEC3BP05452 202 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 SERPINE2P07093 398 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 IGHV4-30-4P0DP06 118 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 ARL3P36405 182 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 MECP2P51608 486 aaKnown RBP10.32□□□□□ -0.76
CTSA-218ENST00000607814 H2BFWTQ7Z2G1 175 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 EEF1AKMT3Q96AZ1 226 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 C19orf73Q9NVV2 129 aa10.32□□□□□ -0.76
CTSA-218ENST00000607814 C3orf85A0A1B0GTC6 90 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 DHFRP00374 187 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 GPR183P32249 361 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 RND3P61587 244 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 TATDN3Q17R31 274 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 SGPP2Q8IWX5 399 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 OR4A16Q8NH70 328 aa10.31□□□□□ -0.76
CTSA-218ENST00000607814 CACNG8Q8WXS5 425 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms