RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ZNF585BQ52M93 769 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 UBE2NLQ5JXB2 153 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 PLET1Q6UQ28 207 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 BTNL8Q6UX41 500 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 LYSMD2Q8IV50 215 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 CADM3Q8N126 398 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 OR52B4Q8NGK2 314 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 OR1L8Q8NGR8 309 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 VN1R17PQ8TDU5 208 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 BORCS5Q969J3 196 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 MARC2Q969Z3 335 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 MOB3AQ96BX8 217 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 DGCR14Q96DF8 476 aaKnown RBP5.7□□□□□ -1.5
CUX1-219ENST00000606749 ZNF2Q9BSG1 426 aaPredicted RBP5.7□□□□□ -1.5
CUX1-219ENST00000606749 QTRT1Q9BXR0 403 aaKnown RBP5.7□□□□□ -1.5
CUX1-219ENST00000606749 ZNF436Q9C0F3 470 aaPredicted RBP5.7□□□□□ -1.5
CUX1-219ENST00000606749 NDUFA4L2Q9NRX3 87 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 COMMD9Q9P000 198 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 THYN1Q9P016 225 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 MRPL27Q9P0M9 148 aaKnown RBP5.7□□□□□ -1.5
CUX1-219ENST00000606749 ANAPC10Q9UM13 185 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 CSMD3Q7Z407 3707 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 OR2T8A6NH00 312 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 MARCH11A6NNE9 402 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 TGOLN2O43493 480 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 KRASP01116 189 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 RLN1P04808 185 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 OR13C7P0DN81 318 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 G6PCP35575 357 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 LPAR6P43657 344 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 MFAP2P55001 183 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 TAS2R46P59540 309 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 TAS2R20P59543 309 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 ERVK-16P61578 105 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 TMEM69Q5SWH9 247 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 THOC7Q6I9Y2 204 aaKnown RBP5.69□□□□□ -1.5
CUX1-219ENST00000606749 SLC25A24Q6NUK1 477 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 RBPMS2Q6ZRY4 209 aaKnown RBP5.69□□□□□ -1.5
CUX1-219ENST00000606749 HSD17B13Q7Z5P4 300 aaPredicted RBP5.69□□□□□ -1.5
CUX1-219ENST00000606749 SAMD12Q8N8I0 201 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 GDPD1Q8N9F7 314 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 OR5H2Q8NGV7 314 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 OR6F1Q8NGZ6 308 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 FCAMRQ8WWV6 532 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 YIPF6Q96EC8 236 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 C5orf66Q9H5L9 145 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 NSG2Q9Y328 171 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 UFC1Q9Y3C8 167 aa5.69□□□□□ -1.5
CUX1-219ENST00000606749 LYSTQ99698 3801 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 LOC102724200A0A096LPH7 203 aaPredicted RBP5.68□□□□□ -1.5
CUX1-219ENST00000606749 F8W735 103 aaPredicted RBP5.68□□□□□ -1.5
CUX1-219ENST00000606749 GPR31O00270 319 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 CYB5BO43169 146 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 SNAPC5O75971 98 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 PRSS3P35030 304 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 HRH1P35367 487 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 LSM3P62310 102 aaKnown RBP5.68□□□□□ -1.5
CUX1-219ENST00000606749 SPSB3Q6PJ21 355 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 CMTM1Q8IZ96 169 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 OR2C3Q8N628 320 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 TSPAN14Q8NG11 270 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 OR1L6Q8NGR2 347 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 SCARB1Q8WTV0 552 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 BSCL2Q96G97 398 aaPredicted RBP5.68□□□□□ -1.5
CUX1-219ENST00000606749 ATP6V0BQ99437 205 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 OVOL2Q9BRP0 275 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 GGTLC1Q9BX51 225 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 HINT2Q9BX68 163 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 OR51B2Q9Y5P1 312 aa5.68□□□□□ -1.5
CUX1-219ENST00000606749 F11RQ9Y624 299 aaKnown RBP5.68□□□□□ -1.5
CUX1-219ENST00000606749 A0A087WXM4 84 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 IGHV3-21A0A0B4J1V1 117 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 DBX1A6NMT0 343 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 K7EIM0 57 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 K7EMT4 169 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 NDUFA4O00483 81 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 TSPAN4O14817 238 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 JTBO76095 146 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 EIF4EP06730 217 aaKnown RBP5.67□□□□□ -1.5
CUX1-219ENST00000606749 HLA-DMAP28067 261 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 ADMP35318 185 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 TSPAN5P62079 268 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 PHLDA2Q53GA4 152 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 LPCAT3Q6P1A2 487 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 SLC38A6Q8IZM9 456 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 OR5B3Q8NH48 314 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 GPX8Q8TED1 209 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 TMEM190Q8WZ59 177 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 LSM10Q969L4 123 aaKnown RBP5.67□□□□□ -1.5
CUX1-219ENST00000606749 SLC25A46Q96AG3 418 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 TMEM56Q96MV1 263 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 SPAG8Q99932 426 aaPredicted RBP5.67□□□□□ -1.5
CUX1-219ENST00000606749 CHRDL1Q9BU40 450 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 FXYD6Q9H0Q3 95 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 DAZ1Q9NQZ3 744 aaKnown RBP5.67□□□□□ -1.5
CUX1-219ENST00000606749 FAM212BQ9NTI7 297 aaPredicted RBP5.67□□□□□ -1.5
CUX1-219ENST00000606749 TMEM14BQ9NUH8 114 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 FKBP11Q9NYL4 201 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 C21orf62Q9NYP8 219 aa5.67□□□□□ -1.5
CUX1-219ENST00000606749 PRNDQ9UKY0 176 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms