RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 TP53RKQ96S44 253 aa10.38□□□□□ -0.75
CTSA-212ENST00000606394 LINC00574Q9H8X3 128 aa10.38□□□□□ -0.75
CTSA-212ENST00000606394 TRAPPC2LQ9UL33 140 aa10.38□□□□□ -0.75
CTSA-212ENST00000606394 NSG2Q9Y328 171 aa10.38□□□□□ -0.75
CTSA-212ENST00000606394 OR2W1Q9Y3N9 320 aa10.38□□□□□ -0.75
CTSA-212ENST00000606394 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
CTSA-212ENST00000606394 FRAS1Q86XX4 4008 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 IGKV1-6A0A0C4DH72 117 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 TMEM30CPA0ZSE6 113 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 MSGN1A6NI15 193 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 NCBP2LA6PVI3 153 aaKnown RBP10.37□□□□□ -0.75
CTSA-212ENST00000606394 KRBOX1C9JBD0 128 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 H0Y980 276 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 SHOXO15266 292 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 VDAC1P21796 283 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 NFYBP25208 207 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
CTSA-212ENST00000606394 ZNF616Q08AN1 781 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 ZNF818PQ6ZRF7 136 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 LYZL2Q7Z4W2 148 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 Q8N6K4 173 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 SLC35G3Q8N808 338 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 PLPPR1Q8TBJ4 325 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 MYOZ3Q8TDC0 251 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 TMEM56Q96MV1 263 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 KCNIP1Q9NZI2 227 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 TMEM56-RWDD3S4R434 201 aa10.37□□□□□ -0.75
CTSA-212ENST00000606394 ALMS1Q8TCU4 4167 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 A8MZ25 164 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 HSD17B6O14756 317 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 ST8SIA3O43173 380 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 IGF1P05019 195 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 FGF2P09038 288 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 CGB3P0DN86 165 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 CGB7P0DN87 165 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 GP9P14770 177 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 UCP1P25874 307 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 ZNF816Q0VGE8 651 aaPredicted RBP10.36□□□□□ -0.75
CTSA-212ENST00000606394 HMGN3Q15651 99 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 UTF1Q5T230 341 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 Q8N9W7 124 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 OR10A7Q8NGE5 316 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 OR1N2Q8NGR9 330 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 OR2T10Q8NGZ9 312 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 COQ2Q96H96 371 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 EAF1Q96JC9 268 aaPredicted RBP10.36□□□□□ -0.75
CTSA-212ENST00000606394 CCL28Q9NRJ3 127 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 CYTL1Q9NRR1 136 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 MBNL3Q9NUK0 354 aaKnown RBP10.36□□□□□ -0.75
CTSA-212ENST00000606394 PSG11Q9UQ72 335 aa10.36□□□□□ -0.75
CTSA-212ENST00000606394 IGKV1D-13A0A0B4J2D9 117 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 OVOL1O14753 267 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 MBPP02686 304 aaPredicted RBP10.35□□□□□ -0.75
CTSA-212ENST00000606394 GAPDHP04406 335 aaKnown RBP10.35□□□□□ -0.75
CTSA-212ENST00000606394 IGKV1-13P0DP09 117 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 RCC1P18754 421 aaPredicted RBP10.35□□□□□ -0.75
CTSA-212ENST00000606394 PVALBP20472 110 aaPredicted RBP10.35□□□□□ -0.75
CTSA-212ENST00000606394 P2RY1P47900 373 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 DIAPH2-AS1Q14236 149 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 FAM74A1Q5RGS3 127 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 TRAT1Q6PIZ9 186 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 BVESQ8NE79 360 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 OR10V1Q8NGI7 309 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 OR4D5Q8NGN0 318 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 OR10X1Q8NGY0 326 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 IL17DQ8TAD2 202 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 LHFPL5Q8TAF8 219 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 RNF141Q8WVD5 230 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 RASL11BQ9BPW5 248 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 RAB9BQ9NP90 201 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 CALYQ9NYX4 217 aa10.35□□□□□ -0.75
CTSA-212ENST00000606394 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
CTSA-212ENST00000606394 HSPA12AO43301 675 aa10.34□□□□□ -0.75
CTSA-212ENST00000606394 SAP30O75446 220 aa10.34□□□□□ -0.75
CTSA-212ENST00000606394 GNMTQ14749 295 aa10.34□□□□□ -0.75
CTSA-212ENST00000606394 ASPHD1Q5U4P2 390 aa10.34□□□□□ -0.75
CTSA-212ENST00000606394 SELENOHQ8IZQ5 122 aaKnown RBP10.34□□□□□ -0.75
CTSA-212ENST00000606394 IL1F10Q8WWZ1 152 aa10.34□□□□□ -0.75
CTSA-212ENST00000606394 IDI2-AS1Q9NZ38 188 aa10.34□□□□□ -0.75
CTSA-212ENST00000606394 FBXL17Q9UF56 701 aa10.34□□□□□ -0.75
CTSA-212ENST00000606394 RCL1Q9Y2P8 373 aaKnown RBP10.34□□□□□ -0.75
CTSA-212ENST00000606394 IGHV1-3A0A0C4DH29 117 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 PGLYRP1O75594 196 aaPredicted RBP10.33□□□□□ -0.76
CTSA-212ENST00000606394 GZMHP20718 246 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 F2RP25116 425 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 CD1BP29016 333 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 UQCC3Q6UW78 93 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 MOB3BQ86TA1 216 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 ZNF491Q8N8L2 437 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 S1PR3Q99500 378 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 SPATA25Q9BR10 227 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 TAF9BQ9HBM6 251 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 OR2S2Q9NQN1 319 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 OR1A1Q9P1Q5 309 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 RBM7Q9Y580 266 aaKnown RBP10.33□□□□□ -0.76
CTSA-212ENST00000606394 PCLOQ9Y6V0 5065 aa10.33□□□□□ -0.76
CTSA-212ENST00000606394 HERC2O95714 4834 aa10.32□□□□□ -0.76
CTSA-212ENST00000606394 RAB19A4D1S5 217 aa10.32□□□□□ -0.76
CTSA-212ENST00000606394 CRYZL1O95825 349 aa10.32□□□□□ -0.76
CTSA-212ENST00000606394 MOSP00540 346 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms