RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TRIM40Q6P9F5 258 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 SIGLECL1Q8N7X8 197 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 OR8B12Q8NGG6 310 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 OR2T10Q8NGZ9 312 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 KIR2DL4Q99706 377 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 KXD1Q9BQD3 176 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 EBPLQ9BY08 206 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 OR5V1Q9UGF6 321 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 NUP214P35658 2090 aaPredicted RBP4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 A0A1B0GTH9 108 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 DPRXA6NFQ7 191 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 M0R2Z0 102 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 TTRP02766 147 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 CRYGDP07320 174 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 CT45A10P0DMU9 189 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 CR2P20023 1033 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 LMO2P25791 158 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 KRTDAPP60985 99 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 EFEMP1Q12805 493 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 KLRD1Q13241 179 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 ZFAND6Q6FIF0 208 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 NOXRED1Q6NXP6 359 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 GAPTQ8N292 157 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 OR4C3Q8NH37 302 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 SPATA3Q8NHX4 192 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF563Q8TA94 476 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 OR51E1Q8TCB6 317 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 MBD3L1Q8WWY6 194 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 GGTLC1Q9BX51 225 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 SAMD10Q9BYL1 202 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 TMEM74BQ9NUR3 256 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 FAM30AQ9NZY2 134 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 TRAPPC1Q9Y5R8 145 aa4.1□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF816-ZNF321PA0A0X1KG74 233 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 ZNF736B4DX44 427 aaPredicted RBP4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CD3DP04234 171 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 PIRTP0C851 137 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 SRIP30626 198 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CCL23P55773 120 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 LINC00310P59036 64 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 Q0VG73 95 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 MFAP5Q13361 173 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 VSTM2AQ8TAG5 236 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 C8orf46Q8TAG6 207 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 APOBEC4Q8WW27 367 aaKnown RBP4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 GPER1Q99527 375 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 AGMATQ9BSE5 352 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 TM2D2Q9BX73 214 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 TM2D1Q9BX74 207 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 PARP12Q9H0J9 701 aaKnown RBP4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 GPR84Q9NQS5 396 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 KIAA1671Q9BY89 1806 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 SCN5AQ14524 2016 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 SAA2-SAA4A0A096LPE2 208 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 SNURFLB1AK76 121 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 GPR137BO60478 399 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 NHLRC4P0CG21 123 aaPredicted RBP4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CT45A6P0DMU7 189 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CT45A5P0DMU8 189 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CT45A7P0DMV0 189 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 EVI2AP22794 236 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 SMIM11AP58511 58 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 IGFBP7Q16270 282 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CT45A1Q5HYN5 189 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 HRCT1Q6UXD1 115 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 SFTPA2Q8IWL1 248 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 SUMF1Q8NBK3 374 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 OR10G7Q8NGN6 311 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 OR4K13Q8NH42 304 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 OR10D3Q8NH80 312 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CLDND2Q8NHS1 167 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CT45A3Q8NHU0 189 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 FAM213BQ8TBF2 198 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 Q8TCH9 128 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 DERL3Q96Q80 235 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 OVOL2Q9BRP0 275 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 PLA2G12AQ9BZM1 189 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 ULBP3Q9BZM4 244 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 CST11Q9H112 138 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 ANXA10Q9UJ72 324 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 TP53TG3Q9ULZ0 132 aa4.09□□□□□ -1.75
SPTBN1-206ENST00000602898 TNRC6AQ8NDV7 1962 aaKnown RBP4.09□□□□□ -1.76
SPTBN1-206ENST00000602898 H0YJW9 148 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 SYNGR1O43759 233 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 NDUFS7O75251 213 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 DHRS3O75911 302 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 SERF1AO75920 110 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 SLC2A10O95528 541 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 DBIP07108 87 aaKnown RBP4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 GPX1P07203 203 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 FCGR2CP31995 323 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 ACVRL1P37023 503 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 IL15RAQ13261 267 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 UNC119Q13432 240 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 LY6DQ14210 128 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 ELOCQ15369 112 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 FRG2Q64ET8 278 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 OR13A1Q8NGR1 328 aa4.08□□□□□ -1.76
SPTBN1-206ENST00000602898 OR10AG1Q8NH19 301 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms