RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 RUNX1Q01196 453 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 KLK9Q2XQG4 91 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 AARDQ4LEZ3 155 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 TMEM268Q5VZI3 342 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 LGI3Q8N145 548 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 LRTM2Q8N967 370 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 C4orf3Q8WVX3 66 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 ALX4Q9H161 411 aaPredicted RBP10.8□□□□□ -0.68
RNF40-212ENST00000602784 KLK9Q9UKQ9 250 aa10.8□□□□□ -0.68
RNF40-212ENST00000602784 TRBV9A0A0B4J1U6 114 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 A0A0B4J2A0 478 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 A0A0G2JLM5 398 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 DUXBA0A1W2PPF3 345 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 IGLC7A0M8Q6 106 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 NUDT19A8MXV4 375 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 TSPAN15O95858 294 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 DHFRP00374 187 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 TRGV3P03979 118 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 TCRBP04435 133 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 CTRB1P17538 263 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 VAMP1P23763 118 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 PSMB6P28072 239 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 HSPE1P61604 102 aaKnown RBP10.79□□□□□ -0.68
RNF40-212ENST00000602784 IFITM3Q01628 133 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 PPP1R1AQ13522 171 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 CTRB2Q6GPI1 263 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 MRPL41Q8IXM3 137 aaKnown RBP10.79□□□□□ -0.68
RNF40-212ENST00000602784 KLHL30-AS1Q8NEE0 82 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 RNASE11Q8TAA1 199 aaKnown RBP10.79□□□□□ -0.68
RNF40-212ENST00000602784 USMG5Q96IX5 58 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 MS4A10Q96PG2 267 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.79□□□□□ -0.68
RNF40-212ENST00000602784 ZNF355PQ9NSJ1 428 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 COA4Q9NYJ1 87 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 CACFD1Q9UGQ2 172 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 SHPKQ9UHJ6 478 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 FLVCR2Q9UPI3 526 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 TRRAPQ9Y4A5 3859 aa10.79□□□□□ -0.68
RNF40-212ENST00000602784 A0A0G2JRQ6 117 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 FAM240BA0A1B0GVZ2 78 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 C9orf170A2RU37 121 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 DBX1A6NMT0 343 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 I3L521 148 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 RBMXL2O75526 392 aaKnown RBP10.78□□□□□ -0.68
RNF40-212ENST00000602784 AREGP15514 252 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 RAB25P57735 213 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 TPPP2P59282 170 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 IZUMO4Q1ZYL8 232 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 SLC35G3Q8N808 338 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 NECAP1Q8NC96 275 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 OR10W1Q8NGF6 305 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 CASTOR1Q8WTX7 329 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 C20orf85Q9H1P6 137 aa10.78□□□□□ -0.68
RNF40-212ENST00000602784 FAM223BA6NKX1 122 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 INS-IGF2F8WCM5 200 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 DUS4LO95620 317 aaKnown RBP10.77□□□□□ -0.69
RNF40-212ENST00000602784 OR4E1P0C645 316 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 OR13C7P0DN81 318 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 HIST1H1BP16401 226 aaKnown RBP10.77□□□□□ -0.69
RNF40-212ENST00000602784 MYCNOSP40205 109 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 MECP2P51608 486 aaKnown RBP10.77□□□□□ -0.69
RNF40-212ENST00000602784 DEFA1P59665 94 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 DEFA3P59666 94 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 PRCDQ00LT1 54 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 WT1-ASQ06250 92 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 ANKRD55Q3KP44 614 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 NMSQ5H8A3 153 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 Q6ZRM9 215 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 C18orf65Q6ZTR6 163 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 LYZL2Q7Z4W2 148 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 LYG2Q86SG7 212 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 FAM223AQ8IWN6 122 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 OR52E5Q8NH55 327 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 GPR146Q96CH1 333 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 GNB4Q9HAV0 340 aa10.77□□□□□ -0.69
RNF40-212ENST00000602784 C13orf42A0A1B0GVH6 325 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 CCL24O00175 119 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 CYB5BO43169 146 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 ST8SIA3O43173 380 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 HLA-AP01891 365 aaKnown RBP10.76□□□□□ -0.69
RNF40-212ENST00000602784 LGALS1P09382 135 aaKnown RBP10.76□□□□□ -0.69
RNF40-212ENST00000602784 SLC25A6P12236 298 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 ANXA7P20073 488 aaKnown RBP10.76□□□□□ -0.69
RNF40-212ENST00000602784 RHOGP84095 191 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 DHRS2Q13268 280 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 PDLIM3Q53GG5 364 aaPredicted RBP10.76□□□□□ -0.69
RNF40-212ENST00000602784 C8orf86Q6ZUL3 223 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 DUSP18Q8NEJ0 188 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 WFDC9Q8NEX5 89 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 RAX2Q96IS3 184 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 FANCD2OSQ96PS1 177 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 P2RX4Q99571 388 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 PDCD10Q9BUL8 212 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 HINT2Q9BX68 163 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 NUDT15Q9NV35 164 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 PRR13Q9NZ81 148 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 CACNG5Q9UF02 275 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 TMED3Q9Y3Q3 217 aa10.76□□□□□ -0.69
RNF40-212ENST00000602784 A0A1B0GU03 582 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms